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Arabidopsis homologues of the autophagy protein Atg8 are a novel family of microtubule binding proteins.
Ketelaar T, Voss C, Dimmock SA, Thumm M, Hussey PJ. Ketelaar T, et al. Among authors: thumm m. FEBS Lett. 2004 Jun 4;567(2-3):302-6. doi: 10.1016/j.febslet.2004.04.088. FEBS Lett. 2004. PMID: 15178341
GFP-Atg8 protease protection as a tool to monitor autophagosome biogenesis.
Nair U, Thumm M, Klionsky DJ, Krick R. Nair U, et al. Among authors: thumm m. Autophagy. 2011 Dec;7(12):1546-50. doi: 10.4161/auto.7.12.18424. Autophagy. 2011. PMID: 22108003 Free PMC article.
Cheating on ubiquitin with Atg8.
Krick R, Bremer S, Welter E, Eskelinen EL, Thumm M. Krick R, et al. Among authors: thumm m. Autophagy. 2011 Feb;7(2):250-1. doi: 10.4161/auto.7.2.14383. Epub 2011 Feb 1. Autophagy. 2011. PMID: 21150310
A comprehensive glossary of autophagy-related molecules and processes.
Klionsky DJ, Codogno P, Cuervo AM, Deretic V, Elazar Z, Fueyo-Margareto J, Gewirtz DA, Kroemer G, Levine B, Mizushima N, Rubinsztein DC, Thumm M, Tooze SA. Klionsky DJ, et al. Among authors: thumm m. Autophagy. 2010 May;6(4):438-48. doi: 10.4161/auto.6.4.12244. Epub 2010 May 16. Autophagy. 2010. PMID: 20484971 Free PMC article.
Guidelines for the use and interpretation of assays for monitoring autophagy in higher eukaryotes.
Klionsky DJ, Abeliovich H, Agostinis P, Agrawal DK, Aliev G, Askew DS, Baba M, Baehrecke EH, Bahr BA, Ballabio A, Bamber BA, Bassham DC, Bergamini E, Bi X, Biard-Piechaczyk M, Blum JS, Bredesen DE, Brodsky JL, Brumell JH, Brunk UT, Bursch W, Camougrand N, Cebollero E, Cecconi F, Chen Y, Chin LS, Choi A, Chu CT, Chung J, Clarke PG, Clark RS, Clarke SG, Clavé C, Cleveland JL, Codogno P, Colombo MI, Coto-Montes A, Cregg JM, Cuervo AM, Debnath J, Demarchi F, Dennis PB, Dennis PA, Deretic V, Devenish RJ, Di Sano F, Dice JF, Difiglia M, Dinesh-Kumar S, Distelhorst CW, Djavaheri-Mergny M, Dorsey FC, Dröge W, Dron M, Dunn WA Jr, Duszenko M, Eissa NT, Elazar Z, Esclatine A, Eskelinen EL, Fésüs L, Finley KD, Fuentes JM, Fueyo J, Fujisaki K, Galliot B, Gao FB, Gewirtz DA, Gibson SB, Gohla A, Goldberg AL, Gonzalez R, González-Estévez C, Gorski S, Gottlieb RA, Häussinger D, He YW, Heidenreich K, Hill JA, Høyer-Hansen M, Hu X, Huang WP, Iwasaki A, Jäättelä M, Jackson WT, Jiang X, Jin S, Johansen T, Jung JU, Kadowaki M, Kang C, Kelekar A, Kessel DH, Kiel JA, Kim HP, Kimchi A, Kinsella TJ, Kiselyov K, Kitamoto K, Knecht E, Komatsu M, Kominami E, Kondo S, Kovács AL, Kroemer G, Kuan CY, Kumar R, Kundu M, Landry J, Laporte M, Le W, Lei HY, Lenardo MJ, Levine B, Lieberman A, Lim KL, Lin FC, Liou W, Liu LF, Lopez-Berestein G, López-Otín C, Lu B, Macleod KF, Malorni W, Martinet W, Matsuoka K, Mautner J, Meijer AJ, Meléndez A, Michels P, Miotto G, Mistiaen WP, Mizushima N, Mograbi B, Monastyrska I, Moore MN, Moreira PI, Moriyasu Y, Motyl T, Münz C, Murphy LO, Naqvi NI, Neufeld TP, Nishino I, Nixon RA, Noda T, Nürnberg B, Ogawa M, Oleinick NL, Olsen LJ, Ozpolat B, Paglin S, Palmer GE, Papassideri I, Parkes M, Perlmutter DH, Perry G, Piacentini M, Pinkas-Kramarski R, Prescott M, Proikas-Cezanne T, Raben N, Rami A, Reggiori F, Rohrer B, Rubinsztein DC, Ryan KM, Sadoshima J, Sakagami H, Sakai Y, Sandri M, Sasakawa C, Sass M, Schneider C, Seglen PO, Seleverstov O, Settleman J, Shacka JJ, Shapiro IM, Sibirny A, Silva-Zacarin EC, Simon HU, Simone C, Simonsen A, Smith MA, Spanel-Borowski K, Srinivas V, Steeves M, Stenmark H, Stromhaug PE, Subauste CS, Sugimoto S, Sulzer D, Suzuki T, Swanson MS, Tabas I, Takeshita F, Talbot NJ, Tallóczy Z, Tanaka K, Tanaka K, Tanida I, Taylor GS, Taylor JP, Terman A, Tettamanti G, Thompson CB, Thumm M, Tolkovsky AM, Tooze SA, Truant R, Tumanovska LV, Uchiyama Y, Ueno T, Uzcátegui NL, van der Klei I, Vaquero EC, Vellai T, Vogel MW, Wang HG, Webster P, Wiley JW, Xi Z, Xiao G, Yahalom J, Yang JM, Yap G, Yin XM, Yoshimori T, Yu L, Yue Z, Yuzaki M, Zabirnyk O, Zheng X, Zhu X, Deter RL. Klionsky DJ, et al. Among authors: thumm m. Autophagy. 2008 Feb;4(2):151-75. doi: 10.4161/auto.5338. Epub 2007 Nov 21. Autophagy. 2008. PMID: 18188003 Free PMC article. Review.
Dissecting the localization and function of Atg18, Atg21 and Ygr223c.
Krick R, Henke S, Tolstrup J, Thumm M. Krick R, et al. Among authors: thumm m. Autophagy. 2008 Oct;4(7):896-910. doi: 10.4161/auto.6801. Epub 2008 Oct 18. Autophagy. 2008. PMID: 18769150
Uth1 is a mitochondrial inner membrane protein dispensable for post-log-phase and rapamycin-induced mitophagy.
Welter E, Montino M, Reinhold R, Schlotterhose P, Krick R, Dudek J, Rehling P, Thumm M. Welter E, et al. Among authors: thumm m. FEBS J. 2013 Oct;280(20):4970-82. doi: 10.1111/febs.12468. Epub 2013 Sep 2. FEBS J. 2013. PMID: 23910823
Atg21 is required for effective recruitment of Atg8 to the preautophagosomal structure during the Cvt pathway.
Meiling-Wesse K, Barth H, Voss C, Eskelinen EL, Epple UD, Thumm M. Meiling-Wesse K, et al. Among authors: thumm m. J Biol Chem. 2004 Sep 3;279(36):37741-50. doi: 10.1074/jbc.M401066200. Epub 2004 Jun 11. J Biol Chem. 2004. PMID: 15194695
Processing of a pestivirus protein by a cellular protease specific for light chain 3 of microtubule-associated proteins.
Fricke J, Voss C, Thumm M, Meyers G. Fricke J, et al. Among authors: thumm m. J Virol. 2004 Jun;78(11):5900-12. doi: 10.1128/JVI.78.11.5900-5912.2004. J Virol. 2004. PMID: 15140988 Free PMC article.
The relevance of the phosphatidylinositolphosphat-binding motif FRRGT of Atg18 and Atg21 for the Cvt pathway and autophagy.
Krick R, Tolstrup J, Appelles A, Henke S, Thumm M. Krick R, et al. Among authors: thumm m. FEBS Lett. 2006 Aug 21;580(19):4632-8. doi: 10.1016/j.febslet.2006.07.041. Epub 2006 Jul 21. FEBS Lett. 2006. PMID: 16876790
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