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A genetic signature of interspecies variations in gene expression.
Tirosh I, Weinberger A, Carmi M, Barkai N. Tirosh I, et al. Nat Genet. 2006 Jul;38(7):830-4. doi: 10.1038/ng1819. Epub 2006 Jun 18. Nat Genet. 2006. PMID: 16783381
The pattern and evolution of yeast promoter bendability.
Tirosh I, Berman J, Barkai N. Tirosh I, et al. Trends Genet. 2007 Jul;23(7):318-21. doi: 10.1016/j.tig.2007.03.015. Epub 2007 Apr 6. Trends Genet. 2007. PMID: 17418911 Review.
Comparative biology: beyond sequence analysis.
Tirosh I, Bilu Y, Barkai N. Tirosh I, et al. Curr Opin Biotechnol. 2007 Aug;18(4):371-7. doi: 10.1016/j.copbio.2007.07.003. Epub 2007 Aug 10. Curr Opin Biotechnol. 2007. PMID: 17693073 Review.
On the relation between promoter divergence and gene expression evolution.
Tirosh I, Weinberger A, Bezalel D, Kaganovich M, Barkai N. Tirosh I, et al. Mol Syst Biol. 2008;4:159. doi: 10.1038/msb4100198. Epub 2008 Jan 15. Mol Syst Biol. 2008. PMID: 18197176 Free PMC article.
Evolution of gene sequence and gene expression are not correlated in yeast.
Tirosh I, Barkai N. Tirosh I, et al. Trends Genet. 2008 Mar;24(3):109-13. doi: 10.1016/j.tig.2007.12.004. Epub 2008 Feb 4. Trends Genet. 2008. PMID: 18249461
Two strategies for gene regulation by promoter nucleosomes.
Tirosh I, Barkai N. Tirosh I, et al. Genome Res. 2008 Jul;18(7):1084-91. doi: 10.1101/gr.076059.108. Epub 2008 Apr 30. Genome Res. 2008. PMID: 18448704 Free PMC article.
Here, we examine the connection between patterns of nucleosome occupancy and the capacity to modulate gene expression upon changing conditions, i.e., transcriptional plasticity. ...
Here, we examine the connection between patterns of nucleosome occupancy and the capacity to modulate gene expression upon changing conditio …
The histone H2B-specific ubiquitin ligase RNF20/hBRE1 acts as a putative tumor suppressor through selective regulation of gene expression.
Shema E, Tirosh I, Aylon Y, Huang J, Ye C, Moskovits N, Raver-Shapira N, Minsky N, Pirngruber J, Tarcic G, Hublarova P, Moyal L, Gana-Weisz M, Shiloh Y, Yarden Y, Johnsen SA, Vojtesek B, Berger SL, Oren M. Shema E, et al. Genes Dev. 2008 Oct 1;22(19):2664-76. doi: 10.1101/gad.1703008. Genes Dev. 2008. PMID: 18832071 Free PMC article.
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