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85 results
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Comparative analysis indicates regulatory neofunctionalization of yeast duplicates.
Tirosh I, Barkai N. Tirosh I, et al. Genome Biol. 2007;8(4):R50. doi: 10.1186/gb-2007-8-4-r50. Genome Biol. 2007. PMID: 17411427 Free PMC article.
Immunohistochemical quantification of partial-EMT in oral cavity squamous cell carcinoma primary tumors is associated with nodal metastasis.
Parikh AS, Puram SV, Faquin WC, Richmon JD, Emerick KS, Deschler DG, Varvares MA, Tirosh I, Bernstein BE, Lin DT. Parikh AS, et al. Among authors: tirosh i. Oral Oncol. 2019 Dec;99:104458. doi: 10.1016/j.oraloncology.2019.104458. Epub 2019 Nov 6. Oral Oncol. 2019. PMID: 31704557
Computational verification of protein-protein interactions by orthologous co-expression.
Tirosh I, Barkai N. Tirosh I, et al. BMC Bioinformatics. 2005 Mar 2;6:40. doi: 10.1186/1471-2105-6-40. BMC Bioinformatics. 2005. PMID: 15740634 Free PMC article.
A genetic signature of interspecies variations in gene expression.
Tirosh I, Weinberger A, Carmi M, Barkai N. Tirosh I, et al. Nat Genet. 2006 Jul;38(7):830-4. doi: 10.1038/ng1819. Epub 2006 Jun 18. Nat Genet. 2006. PMID: 16783381
The pattern and evolution of yeast promoter bendability.
Tirosh I, Berman J, Barkai N. Tirosh I, et al. Trends Genet. 2007 Jul;23(7):318-21. doi: 10.1016/j.tig.2007.03.015. Epub 2007 Apr 6. Trends Genet. 2007. PMID: 17418911 Review.
Autocorrelation analysis reveals widespread spatial biases in microarray experiments.
Koren A, Tirosh I, Barkai N. Koren A, et al. Among authors: tirosh i. BMC Genomics. 2007 Jun 12;8:164. doi: 10.1186/1471-2164-8-164. BMC Genomics. 2007. PMID: 17565680 Free PMC article.
Comparative biology: beyond sequence analysis.
Tirosh I, Bilu Y, Barkai N. Tirosh I, et al. Curr Opin Biotechnol. 2007 Aug;18(4):371-7. doi: 10.1016/j.copbio.2007.07.003. Epub 2007 Aug 10. Curr Opin Biotechnol. 2007. PMID: 17693073 Review.
On the relation between promoter divergence and gene expression evolution.
Tirosh I, Weinberger A, Bezalel D, Kaganovich M, Barkai N. Tirosh I, et al. Mol Syst Biol. 2008;4:159. doi: 10.1038/msb4100198. Epub 2008 Jan 15. Mol Syst Biol. 2008. PMID: 18197176 Free PMC article.
Evolution of gene sequence and gene expression are not correlated in yeast.
Tirosh I, Barkai N. Tirosh I, et al. Trends Genet. 2008 Mar;24(3):109-13. doi: 10.1016/j.tig.2007.12.004. Epub 2008 Feb 4. Trends Genet. 2008. PMID: 18249461
Two strategies for gene regulation by promoter nucleosomes.
Tirosh I, Barkai N. Tirosh I, et al. Genome Res. 2008 Jul;18(7):1084-91. doi: 10.1101/gr.076059.108. Epub 2008 Apr 30. Genome Res. 2008. PMID: 18448704 Free PMC article.
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