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KEGG for linking genomes to life and the environment.
Kanehisa M, Araki M, Goto S, Hattori M, Hirakawa M, Itoh M, Katayama T, Kawashima S, Okuda S, Tokimatsu T, Yamanishi Y. Kanehisa M, et al. Among authors: tokimatsu t. Nucleic Acids Res. 2008 Jan;36(Database issue):D480-4. doi: 10.1093/nar/gkm882. Epub 2007 Dec 12. Nucleic Acids Res. 2008. PMID: 18077471 Free PMC article.
KEGG OC: a large-scale automatic construction of taxonomy-based ortholog clusters.
Nakaya A, Katayama T, Itoh M, Hiranuka K, Kawashima S, Moriya Y, Okuda S, Tanaka M, Tokimatsu T, Yamanishi Y, Yoshizawa AC, Kanehisa M, Goto S. Nakaya A, et al. Among authors: tokimatsu t. Nucleic Acids Res. 2013 Jan;41(Database issue):D353-7. doi: 10.1093/nar/gks1239. Epub 2012 Nov 27. Nucleic Acids Res. 2013. PMID: 23193276 Free PMC article.
PathPred: an enzyme-catalyzed metabolic pathway prediction server.
Moriya Y, Shigemizu D, Hattori M, Tokimatsu T, Kotera M, Goto S, Kanehisa M. Moriya Y, et al. Among authors: tokimatsu t. Nucleic Acids Res. 2010 Jul;38(Web Server issue):W138-43. doi: 10.1093/nar/gkq318. Epub 2010 Apr 30. Nucleic Acids Res. 2010. PMID: 20435670 Free PMC article.
KaPPA-View4: a metabolic pathway database for representation and analysis of correlation networks of gene co-expression and metabolite co-accumulation and omics data.
Sakurai N, Ara T, Ogata Y, Sano R, Ohno T, Sugiyama K, Hiruta A, Yamazaki K, Yano K, Aoki K, Aharoni A, Hamada K, Yokoyama K, Kawamura S, Otsuka H, Tokimatsu T, Kanehisa M, Suzuki H, Saito K, Shibata D. Sakurai N, et al. Among authors: tokimatsu t. Nucleic Acids Res. 2011 Jan;39(Database issue):D677-84. doi: 10.1093/nar/gkq989. Epub 2010 Nov 19. Nucleic Acids Res. 2011. PMID: 21097783 Free PMC article.
24 results