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84 results
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Frog2: Efficient 3D conformation ensemble generator for small compounds.
Miteva MA, Guyon F, Tufféry P. Miteva MA, et al. Among authors: tuffery p. Nucleic Acids Res. 2010 Jul;38(Web Server issue):W622-7. doi: 10.1093/nar/gkq325. Epub 2010 May 5. Nucleic Acids Res. 2010. PMID: 20444874 Free PMC article.
A new approach to the rapid determination of protein side chain conformations.
Tuffery P, Etchebest C, Hazout S, Lavery R. Tuffery P, et al. J Biomol Struct Dyn. 1991 Jun;8(6):1267-89. doi: 10.1080/07391102.1991.10507882. J Biomol Struct Dyn. 1991. PMID: 1892586
XmMol: an X11 and motif program for macromolecular visualization and modeling.
Tufféry P. Tufféry P. J Mol Graph. 1995 Feb;13(1):67-72, 62. doi: 10.1016/0263-7855(94)00011-g. J Mol Graph. 1995. PMID: 7794836
Prediction of protein side chain conformations: a study on the influence of backbone accuracy on conformation stability in the rotamer space.
Tufféry P, Etchebest C, Hazout S. Tufféry P, et al. Protein Eng. 1997 Apr;10(4):361-72. doi: 10.1093/protein/10.4.361. Protein Eng. 1997. PMID: 9194160
PredAcc: prediction of solvent accessibility.
Mucchielli-Giorgi MH, Hazout S, Tufféry P. Mucchielli-Giorgi MH, et al. Among authors: tuffery p. Bioinformatics. 1999 Feb;15(2):176-7. doi: 10.1093/bioinformatics/15.2.176. Bioinformatics. 1999. PMID: 10089205
Critical assessment of side-chain conformational space sampling procedures designed for quantifying the effect of side-chain environment.
Gautier R, Tufféry P. Gautier R, et al. Among authors: tuffery p. J Comput Chem. 2003 Nov 30;24(15):1950-61. doi: 10.1002/jcc.10334. J Comput Chem. 2003. PMID: 14515377
A hidden markov model derived structural alphabet for proteins.
Camproux AC, Gautier R, Tufféry P. Camproux AC, et al. Among authors: tuffery p. J Mol Biol. 2004 Jun 4;339(3):591-605. doi: 10.1016/j.jmb.2004.04.005. J Mol Biol. 2004. PMID: 15147844
SCit: web tools for protein side chain conformation analysis.
Gautier R, Camproux AC, Tufféry P. Gautier R, et al. Among authors: tuffery p. Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W508-11. doi: 10.1093/nar/gkh388. Nucleic Acids Res. 2004. PMID: 15215438 Free PMC article.
SA-Search: a web tool for protein structure mining based on a Structural Alphabet.
Guyon F, Camproux AC, Hochez J, Tufféry P. Guyon F, et al. Among authors: tuffery p. Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W545-8. doi: 10.1093/nar/gkh467. Nucleic Acids Res. 2004. PMID: 15215446 Free PMC article.
PPG: online generation of protein pictures and animations.
Binisti C, Salim AA, Tufféry P. Binisti C, et al. Among authors: tuffery p. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W320-3. doi: 10.1093/nar/gki392. Nucleic Acids Res. 2005. PMID: 15980481 Free PMC article.
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