Turner DH - Search Results

1

Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure.

Mathews DH, Sabina J, Zuker M, Turner DH. Mathews DH, et al. Among authors: turner dh. J Mol Biol. 1999 May 21;288(5):911-40. doi: 10.1006/jmbi.1999.2700. J Mol Biol. 1999. PMID: 10329189

2

Improving RNA nearest neighbor parameters for helices by going beyond the two-state model.

Spasic A, Berger KD, Chen JL, Seetin MG, Turner DH, Mathews DH. Spasic A, et al. Among authors: turner dh. Nucleic Acids Res. 2018 Jun 1;46(10):4883-4892. doi: 10.1093/nar/gky270. Nucleic Acids Res. 2018. PMID: 29718397 Free PMC article.

3

RNA Secondary Structure Determination by NMR.

Chen JL, Bellaousov S, Turner DH. Chen JL, et al. Among authors: turner dh. Methods Mol Biol. 2016;1490:177-86. doi: 10.1007/978-1-4939-6433-8_11. Methods Mol Biol. 2016. PMID: 27665599

4

Nuclear Magnetic Resonance-Assisted Prediction of Secondary Structure for RNA: Incorporation of Direction-Dependent Chemical Shift Constraints.

Chen JL, Bellaousov S, Tubbs JD, Kennedy SD, Lopez MJ, Mathews DH, Turner DH. Chen JL, et al. Among authors: turner dh. Biochemistry. 2015 Nov 17;54(45):6769-82. doi: 10.1021/acs.biochem.5b00833. Epub 2015 Nov 3. Biochemistry. 2015. PMID: 26451676 Free PMC article.

5

Structural features of a 3' splice site in influenza a.

Chen JL, Kennedy SD, Turner DH. Chen JL, et al. Among authors: turner dh. Biochemistry. 2015 Jun 2;54(21):3269-85. doi: 10.1021/acs.biochem.5b00012. Epub 2015 May 21. Biochemistry. 2015. PMID: 25909229 Free PMC article.

6

Secondary structure of a conserved domain in an intron of influenza A M1 mRNA.

Jiang T, Kennedy SD, Moss WN, Kierzek E, Turner DH. Jiang T, et al. Among authors: turner dh. Biochemistry. 2014 Aug 19;53(32):5236-48. doi: 10.1021/bi500611j. Epub 2014 Aug 6. Biochemistry. 2014. PMID: 25026548 Free PMC article.

7

The contribution of pseudouridine to stabilities and structure of RNAs.

Kierzek E, Malgowska M, Lisowiec J, Turner DH, Gdaniec Z, Kierzek R. Kierzek E, et al. Among authors: turner dh. Nucleic Acids Res. 2014 Mar;42(5):3492-501. doi: 10.1093/nar/gkt1330. Epub 2013 Dec 24. Nucleic Acids Res. 2014. PMID: 24369424 Free PMC article.

8

NMR reveals the absence of hydrogen bonding in adjacent UU and AG mismatches in an isolated internal loop from ribosomal RNA.

Shankar N, Xia T, Kennedy SD, Krugh TR, Mathews DH, Turner DH. Shankar N, et al. Among authors: turner dh. Biochemistry. 2007 Nov 6;46(44):12665-78. doi: 10.1021/bi700802s. Epub 2007 Oct 11. Biochemistry. 2007. PMID: 17929882

9

Facilitating RNA structure prediction with microarrays.

Kierzek E, Kierzek R, Turner DH, Catrina IE. Kierzek E, et al. Among authors: turner dh. Biochemistry. 2006 Jan 17;45(2):581-93. doi: 10.1021/bi051409+. Biochemistry. 2006. PMID: 16401087 Free PMC article.

10

Thermodynamic stability and structural features of the J4/5 loop in a Pneumocystis carinii group I intron.

Schroeder SJ, Fountain MA, Kennedy SD, Lukavsky PJ, Puglisi JD, Krugh TR, Turner DH. Schroeder SJ, et al. Among authors: turner dh. Biochemistry. 2003 Dec 9;42(48):14184-96. doi: 10.1021/bi0301587. Biochemistry. 2003. PMID: 14640686

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