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Polyamines and linear DNA mediate bacterial threat assessment of bacteriophage infection.
de Mattos CD, Faith DR, Nemudryi AA, Schmidt AK, Bublitz DC, Hammond L, Kinnersley MA, Schwartzkopf CM, Robinson AJ, Joyce A, Michaels LA, Brzozowski RS, Coluccio A, Xing DD, Uchiyama J, Jennings LK, Eswara P, Wiedenheft B, Secor PR. de Mattos CD, et al. Among authors: uchiyama j. Proc Natl Acad Sci U S A. 2023 Feb 28;120(9):e2216430120. doi: 10.1073/pnas.2216430120. Epub 2023 Feb 21. Proc Natl Acad Sci U S A. 2023. PMID: 36802441 Free PMC article.
Characterization of Helicobacter pylori bacteriophage KHP30.
Uchiyama J, Takeuchi H, Kato S, Gamoh K, Takemura-Uchiyama I, Ujihara T, Daibata M, Matsuzaki S. Uchiyama J, et al. Appl Environ Microbiol. 2013 May;79(10):3176-84. doi: 10.1128/AEM.03530-12. Epub 2013 Mar 8. Appl Environ Microbiol. 2013. PMID: 23475617 Free PMC article.
Bacterial Viruses Subcommittee and Archaeal Viruses Subcommittee of the ICTV: update of taxonomy changes in 2021.
Krupovic M, Turner D, Morozova V, Dyall-Smith M, Oksanen HM, Edwards R, Dutilh BE, Lehman SM, Reyes A, Baquero DP, Sullivan MB, Uchiyama J, Nakavuma J, Barylski J, Young MJ, Du S, Alfenas-Zerbini P, Kushkina A, Kropinski AM, Kurtböke I, Brister JR, Lood C, Sarkar BL, Yigang T, Liu Y, Huang L, Wittmann J, Chanishvili N, van Zyl LJ, Rumnieks J, Mochizuki T, Jalasvuori M, Aziz RK, Łobocka M, Stedman KM, Shkoporov AN, Gillis A, Peng X, Enault F, Knezevic P, Lavigne R, Rhee SK, Cvirkaite-Krupovic V, Moraru C, Moreno Switt AI, Poranen MM, Millard A, Prangishvili D, Adriaenssens EM. Krupovic M, et al. Among authors: uchiyama j. Arch Virol. 2021 Nov;166(11):3239-3244. doi: 10.1007/s00705-021-05205-9. Arch Virol. 2021. PMID: 34417873 Free PMC article.
Phylogenic analysis of new viral cluster of large phages with unusual DNA genomes containing uracil in place of thymine in gene-sharing network, using phages S6 and PBS1 and relevant uncultured phages derived from sewage metagenomics.
Uchiyama J, Takemura-Uchiyama I, Gotoh K, Kato SI, Sakaguchi Y, Murakami H, Fukuyama T, Kaneki M, Matsushita O, Matsuzaki S. Uchiyama J, et al. Virus Res. 2022 Oct 2;319:198881. doi: 10.1016/j.virusres.2022.198881. Epub 2022 Aug 4. Virus Res. 2022. PMID: 35934259 Free article.
Abolishment of morphology-based taxa and change to binomial species names: 2022 taxonomy update of the ICTV bacterial viruses subcommittee.
Turner D, Shkoporov AN, Lood C, Millard AD, Dutilh BE, Alfenas-Zerbini P, van Zyl LJ, Aziz RK, Oksanen HM, Poranen MM, Kropinski AM, Barylski J, Brister JR, Chanisvili N, Edwards RA, Enault F, Gillis A, Knezevic P, Krupovic M, Kurtböke I, Kushkina A, Lavigne R, Lehman S, Lobocka M, Moraru C, Moreno Switt A, Morozova V, Nakavuma J, Reyes Muñoz A, Rūmnieks J, Sarkar BL, Sullivan MB, Uchiyama J, Wittmann J, Yigang T, Adriaenssens EM. Turner D, et al. Among authors: uchiyama j. Arch Virol. 2023 Jan 23;168(2):74. doi: 10.1007/s00705-022-05694-2. Arch Virol. 2023. PMID: 36683075 Free PMC article.
Analyses of Short-Term Antagonistic Evolution of Pseudomonas aeruginosa Strain PAO1 and Phage KPP22 (Myoviridae Family, PB1-Like Virus Genus).
Uchiyama J, Suzuki M, Nishifuji K, Kato SI, Miyata R, Nasukawa T, Yamaguchi K, Takemura-Uchiyama I, Ujihara T, Shimakura H, Murakami H, Okamoto N, Sakaguchi Y, Shibayama K, Sakaguchi M, Matsuzaki S. Uchiyama J, et al. Appl Environ Microbiol. 2016 Jul 15;82(15):4482-4491. doi: 10.1128/AEM.00090-16. Print 2016 Aug 1. Appl Environ Microbiol. 2016. PMID: 27208109 Free PMC article.
169 results