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Homoeologous nonreciprocal recombination in polyploid cotton.
Salmon A, Flagel L, Ying B, Udall JA, Wendel JF. Salmon A, et al. New Phytol. 2010 Apr;186(1):123-34. doi: 10.1111/j.1469-8137.2009.03093.x. Epub 2009 Nov 19. New Phytol. 2010. PMID: 19925554
A global assembly of cotton ESTs.
Udall JA, Swanson JM, Haller K, Rapp RA, Sparks ME, Hatfield J, Yu Y, Wu Y, Dowd C, Arpat AB, Sickler BA, Wilkins TA, Guo JY, Chen XY, Scheffler J, Taliercio E, Turley R, McFadden H, Payton P, Klueva N, Allen R, Zhang D, Haigler C, Wilkerson C, Suo J, Schulze SR, Pierce ML, Essenberg M, Kim H, Llewellyn DJ, Dennis ES, Kudrna D, Wing R, Paterson AH, Soderlund C, Wendel JF. Udall JA, et al. Genome Res. 2006 Mar;16(3):441-50. doi: 10.1101/gr.4602906. Epub 2006 Feb 14. Genome Res. 2006. PMID: 16478941 Free PMC article.
A novel approach for characterizing expression levels of genes duplicated by polyploidy.
Udall JA, Swanson JM, Nettleton D, Percifield RJ, Wendel JF. Udall JA, et al. Genetics. 2006 Jul;173(3):1823-7. doi: 10.1534/genetics.106.058271. Epub 2006 May 15. Genetics. 2006. PMID: 16702424 Free PMC article.
A majority of cotton genes are expressed in single-celled fiber.
Hovav R, Udall JA, Hovav E, Rapp R, Flagel L, Wendel JF. Hovav R, et al. Planta. 2008 Jan;227(2):319-29. doi: 10.1007/s00425-007-0619-7. Epub 2007 Sep 12. Planta. 2008. PMID: 17849148
Partitioned expression of duplicated genes during development and evolution of a single cell in a polyploid plant.
Hovav R, Udall JA, Chaudhary B, Rapp R, Flagel L, Wendel JF. Hovav R, et al. Proc Natl Acad Sci U S A. 2008 Apr 22;105(16):6191-5. doi: 10.1073/pnas.0711569105. Epub 2008 Apr 17. Proc Natl Acad Sci U S A. 2008. PMID: 18420816 Free PMC article.
Reciprocal silencing, transcriptional bias and functional divergence of homeologs in polyploid cotton (gossypium).
Chaudhary B, Flagel L, Stupar RM, Udall JA, Verma N, Springer NM, Wendel JF. Chaudhary B, et al. Genetics. 2009 Jun;182(2):503-17. doi: 10.1534/genetics.109.102608. Epub 2009 Apr 10. Genetics. 2009. PMID: 19363125 Free PMC article.
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