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Trimmomatic: a flexible trimmer for Illumina sequence data.
Bolger AM, Lohse M, Usadel B. Bolger AM, et al. Among authors: usadel b. Bioinformatics. 2014 Aug 1;30(15):2114-20. doi: 10.1093/bioinformatics/btu170. Epub 2014 Apr 1. Bioinformatics. 2014. PMID: 24695404 Free PMC article.
page=trimmomatic CONTACT: usadel@bio1.rwth-aachen.de SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online....
page=trimmomatic CONTACT: usadel@bio1.rwth-aachen.de SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics on …
Algorithm-driven artifacts in median polish summarization of microarray data.
Giorgi FM, Bolger AM, Lohse M, Usadel B. Giorgi FM, et al. Among authors: usadel b. BMC Bioinformatics. 2010 Nov 11;11:553. doi: 10.1186/1471-2105-11-553. BMC Bioinformatics. 2010. PMID: 21070630 Free PMC article.
Integration of metabolite with transcript and enzyme activity profiling during diurnal cycles in Arabidopsis rosettes.
Gibon Y, Usadel B, Blaesing OE, Kamlage B, Hoehne M, Trethewey R, Stitt M. Gibon Y, et al. Among authors: usadel b. Genome Biol. 2006;7(8):R76. doi: 10.1186/gb-2006-7-8-R76. Epub 2006 Aug 17. Genome Biol. 2006. PMID: 16916443 Free PMC article.
Large-scale phenotyping of transgenic tobacco plants (Nicotiana tabacum) to identify essential leaf functions.
Lein W, Usadel B, Stitt M, Reindl A, Ehrhardt T, Sonnewald U, Börnke F. Lein W, et al. Among authors: usadel b. Plant Biotechnol J. 2008 Apr;6(3):246-63. doi: 10.1111/j.1467-7652.2007.00313.x. Epub 2007 Dec 11. Plant Biotechnol J. 2008. PMID: 18086234
A Transcriptional and Metabolic Framework for Secondary Wall Formation in Arabidopsis.
Li Z, Omranian N, Neumetzler L, Wang T, Herter T, Usadel B, Demura T, Giavalisco P, Nikoloski Z, Persson S. Li Z, et al. Among authors: usadel b. Plant Physiol. 2016 Oct;172(2):1334-1351. doi: 10.1104/pp.16.01100. Epub 2016 Aug 26. Plant Physiol. 2016. PMID: 27566165 Free PMC article.
A topological map of the compartmentalized Arabidopsis thaliana leaf metabolome.
Krueger S, Giavalisco P, Krall L, Steinhauser MC, Büssis D, Usadel B, Flügge UI, Fernie AR, Willmitzer L, Steinhauser D. Krueger S, et al. Among authors: usadel b. PLoS One. 2011 Mar 15;6(3):e17806. doi: 10.1371/journal.pone.0017806. PLoS One. 2011. PMID: 21423574 Free PMC article.
Demethylesterification of cell wall pectins in Arabidopsis plays a role in seed germination.
Müller K, Levesque-Tremblay G, Bartels S, Weitbrecht K, Wormit A, Usadel B, Haughn G, Kermode AR. Müller K, et al. Among authors: usadel b. Plant Physiol. 2013 Jan;161(1):305-16. doi: 10.1104/pp.112.205724. Epub 2012 Nov 5. Plant Physiol. 2013. PMID: 23129203 Free PMC article.
Modeling Protein Destiny in Developing Fruit.
Belouah I, Nazaret C, Pétriacq P, Prigent S, Bénard C, Mengin V, Blein-Nicolas M, Denton AK, Balliau T, Augé S, Bouchez O, Mazat JP, Stitt M, Usadel B, Zivy M, Beauvoit B, Gibon Y, Colombié S. Belouah I, et al. Among authors: usadel b. Plant Physiol. 2019 Jul;180(3):1709-1724. doi: 10.1104/pp.19.00086. Epub 2019 Apr 23. Plant Physiol. 2019. PMID: 31015299 Free PMC article.
Overexpression of a pectin methylesterase inhibitor in Arabidopsis thaliana leads to altered growth morphology of the stem and defective organ separation.
Müller K, Levesque-Tremblay G, Fernandes A, Wormit A, Bartels S, Usadel B, Kermode A. Müller K, et al. Among authors: usadel b. Plant Signal Behav. 2013;8(12):e26464. doi: 10.4161/psb.26464. Epub 2013 Sep 20. Plant Signal Behav. 2013. PMID: 24675171 Free PMC article.
An integrative genomics approach for deciphering the complex interactions between ascorbate metabolism and fruit growth and composition in tomato.
Garcia V, Stevens R, Gil L, Gilbert L, Gest N, Petit J, Faurobert M, Maucourt M, Deborde C, Moing A, Poessel JL, Jacob D, Bouchet JP, Giraudel JL, Gouble B, Page D, Alhagdow M, Massot C, Gautier H, Lemaire-Chamley M, de Daruvar A, Rolin D, Usadel B, Lahaye M, Causse M, Baldet P, Rothan C. Garcia V, et al. Among authors: usadel b. C R Biol. 2009 Nov;332(11):1007-21. doi: 10.1016/j.crvi.2009.09.013. Epub 2009 Oct 24. C R Biol. 2009. PMID: 19909923
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