Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

Search Page

Filters

My NCBI Filters

Results by year

Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2011 1
2012 3
2013 3
2014 6
2015 2
2016 8
2017 4
2018 4
2019 7
2020 13
2021 13
2022 15
2023 15
2024 8

Text availability

Article attribute

Article type

Publication date

Search Results

90 results

Results by year

Filters applied: . Clear all
Page 1
Training immunophenotyping deep learning models with the same-section ground truth cell label derivation method improves virtual staining accuracy.
Azam AB, Wee F, Väyrynen JP, Yim WW, Xue YZ, Chua BL, Lim JCT, Somasundaram AC, Tan DSW, Takano A, Chow CY, Khor LY, Lim TKH, Yeong J, Lau MC, Cai Y. Azam AB, et al. Among authors: vayrynen jp. Front Immunol. 2024 Jun 28;15:1404640. doi: 10.3389/fimmu.2024.1404640. eCollection 2024. Front Immunol. 2024. PMID: 39007128 Free PMC article.
Establishing Criteria for Tumor Necrosis as Prognostic Indicator in Colorectal Cancer.
Kastinen M, Sirniö P, Elomaa H, Äijälä VK, Karjalainen H, Tapiainen VV, Pohjanen VM, Kemppainen J, Sliashynskaya K, Ahtiainen M, Rintala J, Meriläinen S, Rautio T, Saarnio J, Mattila TT, Lindgren O, Wirta EV, Helminen O, Seppälä TT, Böhm J, Mecklin JP, Tuomisto A, Mäkinen MJ, Väyrynen JP. Kastinen M, et al. Among authors: vayrynen jp. Am J Surg Pathol. 2024 Jul 15. doi: 10.1097/PAS.0000000000002286. Online ahead of print. Am J Surg Pathol. 2024. PMID: 39004843
Appendectomy and Long-term Colorectal Cancer Incidence, Overall and by Tumor Fusobacterium nucleatum Status.
Kawamura H, Ugai T, Takashima Y, Okadome K, Shimizu T, Mima K, Akimoto N, Haruki K, Arima K, Zhao M, Väyrynen JP, Wu K, Zhang X, Ng K, Nowak JA, Meyerhardt JA, Giovannucci EL, Giannakis M, Chan AT, Huttenhower C, Garrett WS, Song M, Ogino S. Kawamura H, et al. Among authors: vayrynen jp. Ann Surg. 2024 May 6. doi: 10.1097/SLA.0000000000006315. Online ahead of print. Ann Surg. 2024. PMID: 38708875
Multiplexed analysis of macrophage polarisation in pulmonary metastases of microsatellite stable colorectal cancer.
Karjula T, Elomaa H, Väyrynen SA, Kuopio T, Ahtiainen M, Mustonen O, Puro I, Niskakangas A, Mecklin JP, Böhm J, Wirta EV, Seppälä TT, Sihvo E, Yannopoulos F, Helminen O, Väyrynen JP. Karjula T, et al. Among authors: vayrynen jp. Cancer Immunol Immunother. 2024 Feb 22;73(3):59. doi: 10.1007/s00262-024-03646-0. Cancer Immunol Immunother. 2024. PMID: 38386105 Free PMC article.
Quantitative Multiplexed Analysis of Indoleamine 2,3-Dioxygenase (IDO) and Arginase-1 (ARG1) Expression and Myeloid Cell Infiltration in Colorectal Cancer.
Elomaa H, Härkönen J, Väyrynen SA, Ahtiainen M, Ogino S, Nowak JA, Lau MC, Helminen O, Wirta EV, Seppälä TT, Böhm J, Mecklin JP, Kuopio T, Väyrynen JP. Elomaa H, et al. Among authors: vayrynen jp. Mod Pathol. 2024 Apr;37(4):100450. doi: 10.1016/j.modpat.2024.100450. Epub 2024 Feb 16. Mod Pathol. 2024. PMID: 38369188 Free article.
Inverse relationship between Fusobacterium nucleatum amount and tumor CD274 (PD-L1) expression in colorectal carcinoma.
Ugai T, Shimizu T, Kawamura H, Ugai S, Takashima Y, Usui G, Väyrynen JP, Okadome K, Haruki K, Akimoto N, Masugi Y, da Silva A, Mima K, Zhang X, Chan AT, Wang M, Garrett WS, Freeman GJ, Meyerhardt JA, Nowak JA, Song M, Giannakis M, Ogino S. Ugai T, et al. Among authors: vayrynen jp. Clin Transl Immunology. 2023 Aug 2;12(8):e1453. doi: 10.1002/cti2.1453. eCollection 2023. Clin Transl Immunology. 2023. PMID: 37538192 Free PMC article.
90 results