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Refinement of macromolecular structures by the maximum-likelihood method.
Murshudov GN, Vagin AA, Dodson EJ. Murshudov GN, et al. Among authors: vagin aa. Acta Crystallogr D Biol Crystallogr. 1997 May 1;53(Pt 3):240-55. doi: 10.1107/S0907444996012255. Acta Crystallogr D Biol Crystallogr. 1997. PMID: 15299926
JLigand: a graphical tool for the CCP4 template-restraint library.
Lebedev AA, Young P, Isupov MN, Moroz OV, Vagin AA, Murshudov GN. Lebedev AA, et al. Among authors: vagin aa. Acta Crystallogr D Biol Crystallogr. 2012 Apr;68(Pt 4):431-40. doi: 10.1107/S090744491200251X. Epub 2012 Mar 17. Acta Crystallogr D Biol Crystallogr. 2012. PMID: 22505263 Free PMC article.
SPINE workshop on automated X-ray analysis: a progress report.
Bahar M, Ballard C, Cohen SX, Cowtan KD, Dodson EJ, Emsley P, Esnouf RM, Keegan R, Lamzin V, Langer G, Levdikov V, Long F, Meier C, Muller A, Murshudov GN, Perrakis A, Siebold C, Stein N, Turkenburg MG, Vagin AA, Winn M, Winter G, Wilson KS. Bahar M, et al. Among authors: vagin aa. Acta Crystallogr D Biol Crystallogr. 2006 Oct;62(Pt 10):1170-83. doi: 10.1107/S0907444906032197. Epub 2006 Sep 19. Acta Crystallogr D Biol Crystallogr. 2006. PMID: 17001094 Review.
Spherically averaged phased translation function and its application to the search for molecules and fragments in electron-density maps.
Vagin AA, Isupov MN. Vagin AA, et al. Acta Crystallogr D Biol Crystallogr. 2001 Oct;57(Pt 10):1451-6. doi: 10.1107/s0907444901012409. Epub 2001 Sep 21. Acta Crystallogr D Biol Crystallogr. 2001. PMID: 11567159
Efficient anisotropic refinement of macromolecular structures using FFT.
Murshudov GN, Vagin AA, Lebedev A, Wilson KS, Dodson EJ. Murshudov GN, et al. Among authors: vagin aa. Acta Crystallogr D Biol Crystallogr. 1999 Jan;55(Pt 1):247-55. doi: 10.1107/S090744499801405X. Epub 1999 Jan 1. Acta Crystallogr D Biol Crystallogr. 1999. PMID: 10089417
Automated production of small-molecule dictionaries for use in crystallographic refinements.
Greaves RB, Vagin AA, Dodson EJ. Greaves RB, et al. Among authors: vagin aa. Acta Crystallogr D Biol Crystallogr. 1999 Jul;55(Pt 7):1335-9. doi: 10.1107/s0907444999006204. Acta Crystallogr D Biol Crystallogr. 1999. PMID: 10393300
A translation-function approach for heavy-atom location in macromolecular crystallography.
Vagin A, Teplyakov A. Vagin A, et al. Acta Crystallogr D Biol Crystallogr. 1998 May 1;54(Pt 3):400-2. doi: 10.1107/s0907444997014923. Acta Crystallogr D Biol Crystallogr. 1998. PMID: 9761908
An approach to multi-copy search in molecular replacement.
Vagin A, Teplyakov A. Vagin A, et al. Acta Crystallogr D Biol Crystallogr. 2000 Dec;56(Pt 12):1622-4. doi: 10.1107/s0907444900013780. Acta Crystallogr D Biol Crystallogr. 2000. PMID: 11092928
The molecular basis of vancomycin resistance in clinically relevant Enterococci: crystal structure of D-alanyl-D-lactate ligase (VanA).
Roper DI, Huyton T, Vagin A, Dodson G. Roper DI, et al. Proc Natl Acad Sci U S A. 2000 Aug 1;97(16):8921-5. doi: 10.1073/pnas.150116497. Proc Natl Acad Sci U S A. 2000. PMID: 10908650 Free PMC article.
Virulence regulation with Venus flytrap domains: structure and function of the periplasmic moiety of the sensor-kinase BvgS.
Dupré E, Herrou J, Lensink MF, Wintjens R, Vagin A, Lebedev A, Crosson S, Villeret V, Locht C, Antoine R, Jacob-Dubuisson F. Dupré E, et al. PLoS Pathog. 2015 Mar 4;11(3):e1004700. doi: 10.1371/journal.ppat.1004700. eCollection 2015 Mar. PLoS Pathog. 2015. PMID: 25738876 Free PMC article.
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