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Page 1
Methylobacterium genome sequences: a reference blueprint to investigate microbial metabolism of C1 compounds from natural and industrial sources.
Vuilleumier S, Chistoserdova L, Lee MC, Bringel F, Lajus A, Zhou Y, Gourion B, Barbe V, Chang J, Cruveiller S, Dossat C, Gillett W, Gruffaz C, Haugen E, Hourcade E, Levy R, Mangenot S, Muller E, Nadalig T, Pagni M, Penny C, Peyraud R, Robinson DG, Roche D, Rouy Z, Saenampechek C, Salvignol G, Vallenet D, Wu Z, Marx CJ, Vorholt JA, Olson MV, Kaul R, Weissenbach J, Médigue C, Lidstrom ME. Vuilleumier S, et al. Among authors: vallenet d. PLoS One. 2009;4(5):e5584. doi: 10.1371/journal.pone.0005584. Epub 2009 May 18. PLoS One. 2009. PMID: 19440302 Free PMC article.
AMIGene: Annotation of MIcrobial Genes.
Bocs S, Cruveiller S, Vallenet D, Nuel G, Médigue C. Bocs S, et al. Among authors: vallenet d. Nucleic Acids Res. 2003 Jul 1;31(13):3723-6. doi: 10.1093/nar/gkg590. Nucleic Acids Res. 2003. PMID: 12824403 Free PMC article.
Unique features revealed by the genome sequence of Acinetobacter sp. ADP1, a versatile and naturally transformation competent bacterium.
Barbe V, Vallenet D, Fonknechten N, Kreimeyer A, Oztas S, Labarre L, Cruveiller S, Robert C, Duprat S, Wincker P, Ornston LN, Weissenbach J, Marlière P, Cohen GN, Médigue C. Barbe V, et al. Among authors: vallenet d. Nucleic Acids Res. 2004 Oct 28;32(19):5766-79. doi: 10.1093/nar/gkh910. Print 2004. Nucleic Acids Res. 2004. PMID: 15514110 Free PMC article.
Coping with cold: the genome of the versatile marine Antarctica bacterium Pseudoalteromonas haloplanktis TAC125.
Médigue C, Krin E, Pascal G, Barbe V, Bernsel A, Bertin PN, Cheung F, Cruveiller S, D'Amico S, Duilio A, Fang G, Feller G, Ho C, Mangenot S, Marino G, Nilsson J, Parrilli E, Rocha EP, Rouy Z, Sekowska A, Tutino ML, Vallenet D, von Heijne G, Danchin A. Médigue C, et al. Among authors: d amico s, vallenet d. Genome Res. 2005 Oct;15(10):1325-35. doi: 10.1101/gr.4126905. Epub 2005 Sep 16. Genome Res. 2005. PMID: 16169927 Free PMC article.
MaGe: a microbial genome annotation system supported by synteny results.
Vallenet D, Labarre L, Rouy Z, Barbe V, Bocs S, Cruveiller S, Lajus A, Pascal G, Scarpelli C, Médigue C. Vallenet D, et al. Nucleic Acids Res. 2006 Jan 10;34(1):53-65. doi: 10.1093/nar/gkj406. Print 2006. Nucleic Acids Res. 2006. PMID: 16407324 Free PMC article.
Comparative genomics of multidrug resistance in Acinetobacter baumannii.
Fournier PE, Vallenet D, Barbe V, Audic S, Ogata H, Poirel L, Richet H, Robert C, Mangenot S, Abergel C, Nordmann P, Weissenbach J, Raoult D, Claverie JM. Fournier PE, et al. Among authors: vallenet d. PLoS Genet. 2006 Jan;2(1):e7. doi: 10.1371/journal.pgen.0020007. Epub 2006 Jan 13. PLoS Genet. 2006. PMID: 16415984 Free PMC article.
Deciphering the evolution and metabolism of an anammox bacterium from a community genome.
Strous M, Pelletier E, Mangenot S, Rattei T, Lehner A, Taylor MW, Horn M, Daims H, Bartol-Mavel D, Wincker P, Barbe V, Fonknechten N, Vallenet D, Segurens B, Schenowitz-Truong C, Médigue C, Collingro A, Snel B, Dutilh BE, Op den Camp HJ, van der Drift C, Cirpus I, van de Pas-Schoonen KT, Harhangi HR, van Niftrik L, Schmid M, Keltjens J, van de Vossenberg J, Kartal B, Meier H, Frishman D, Huynen MA, Mewes HW, Weissenbach J, Jetten MS, Wagner M, Le Paslier D. Strous M, et al. Among authors: vallenet d. Nature. 2006 Apr 6;440(7085):790-4. doi: 10.1038/nature04647. Nature. 2006. PMID: 16598256
Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography.
Normand P, Lapierre P, Tisa LS, Gogarten JP, Alloisio N, Bagnarol E, Bassi CA, Berry AM, Bickhart DM, Choisne N, Couloux A, Cournoyer B, Cruveiller S, Daubin V, Demange N, Francino MP, Goltsman E, Huang Y, Kopp OR, Labarre L, Lapidus A, Lavire C, Marechal J, Martinez M, Mastronunzio JE, Mullin BC, Niemann J, Pujic P, Rawnsley T, Rouy Z, Schenowitz C, Sellstedt A, Tavares F, Tomkins JP, Vallenet D, Valverde C, Wall LG, Wang Y, Medigue C, Benson DR. Normand P, et al. Among authors: vallenet d. Genome Res. 2007 Jan;17(1):7-15. doi: 10.1101/gr.5798407. Epub 2006 Dec 6. Genome Res. 2007. PMID: 17151343 Free PMC article.
80 results