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Improved recovery of proteome-informative, protein N-terminal peptides by combined fractional diagonal chromatography (COFRADIC).
Staes A, Van Damme P, Helsens K, Demol H, Vandekerckhove J, Gevaert K. Staes A, et al. Among authors: van damme p. Proteomics. 2008 Apr;8(7):1362-70. doi: 10.1002/pmic.200700950. Proteomics. 2008. PMID: 18318009
The human platelet proteome mapped by peptide-centric proteomics: a functional protein profile.
Martens L, Van Damme P, Van Damme J, Staes A, Timmerman E, Ghesquière B, Thomas GR, Vandekerckhove J, Gevaert K. Martens L, et al. Among authors: van damme p, van damme j. Proteomics. 2005 Aug;5(12):3193-204. doi: 10.1002/pmic.200401142. Proteomics. 2005. PMID: 16038019
Caspase-specific and nonspecific in vivo protein processing during Fas-induced apoptosis.
Van Damme P, Martens L, Van Damme J, Hugelier K, Staes A, Vandekerckhove J, Gevaert K. Van Damme P, et al. Among authors: van damme j. Nat Methods. 2005 Oct;2(10):771-7. doi: 10.1038/nmeth792. Nat Methods. 2005. PMID: 16179924
Diagonal reverse-phase chromatography applications in peptide-centric proteomics: ahead of catalogue-omics?
Gevaert K, Van Damme P, Martens L, Vandekerckhove J. Gevaert K, et al. Among authors: van damme p. Anal Biochem. 2005 Oct 1;345(1):18-29. doi: 10.1016/j.ab.2005.01.038. Epub 2005 Mar 14. Anal Biochem. 2005. PMID: 16181830 Review.
Protein processing and other modifications analyzed by diagonal peptide chromatography.
Gevaert K, Van Damme P, Ghesquière B, Vandekerckhove J. Gevaert K, et al. Among authors: van damme p. Biochim Biophys Acta. 2006 Dec;1764(12):1801-10. doi: 10.1016/j.bbapap.2006.09.003. Epub 2006 Sep 14. Biochim Biophys Acta. 2006. PMID: 17035109 Review.
Proteome-wide Identification of HtrA2/Omi Substrates.
Vande Walle L, Van Damme P, Lamkanfi M, Saelens X, Vandekerckhove J, Gevaert K, Vandenabeele P. Vande Walle L, et al. Among authors: van damme p. J Proteome Res. 2007 Mar;6(3):1006-15. doi: 10.1021/pr060510d. Epub 2007 Feb 1. J Proteome Res. 2007. PMID: 17266347
A la carte proteomics with an emphasis on gel-free techniques.
Gevaert K, Van Damme P, Ghesquière B, Impens F, Martens L, Helsens K, Vandekerckhove J. Gevaert K, et al. Among authors: van damme p. Proteomics. 2007 Aug;7(16):2698-718. doi: 10.1002/pmic.200700114. Proteomics. 2007. PMID: 17640001 Review.
Applications of diagonal chromatography for proteome-wide characterization of protein modifications and activity-based analyses.
Gevaert K, Impens F, Van Damme P, Ghesquière B, Hanoulle X, Vandekerckhove J. Gevaert K, et al. Among authors: van damme p. FEBS J. 2007 Dec;274(24):6277-89. doi: 10.1111/j.1742-4658.2007.06149.x. Epub 2007 Nov 16. FEBS J. 2007. PMID: 18021238 Review.
Disentanglement of protease substrate repertoires.
Van Damme P, Vandekerckhove J, Gevaert K. Van Damme P, et al. Biol Chem. 2008 Apr;389(4):371-81. doi: 10.1515/BC.2008.043. Biol Chem. 2008. PMID: 18208357 Review.
Protein processing characterized by a gel-free proteomics approach.
Van Damme P, Impens F, Vandekerckhove J, Gevaert K. Van Damme P, et al. Methods Mol Biol. 2008;484:245-62. doi: 10.1007/978-1-59745-398-1_16. Methods Mol Biol. 2008. PMID: 18592184
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