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Differentially mutated subnetworks discovery.
Hajkarim MC, Upfal E, Vandin F. Hajkarim MC, et al. Among authors: vandin f. Algorithms Mol Biol. 2019 Mar 30;14:10. doi: 10.1186/s13015-019-0146-7. eCollection 2019. Algorithms Mol Biol. 2019. PMID: 30976291 Free PMC article.
De novo pathway-based biomarker identification.
Alcaraz N, List M, Batra R, Vandin F, Ditzel HJ, Baumbach J. Alcaraz N, et al. Among authors: vandin f. Nucleic Acids Res. 2017 Sep 19;45(16):e151. doi: 10.1093/nar/gkx642. Nucleic Acids Res. 2017. PMID: 28934488 Free PMC article.
Pan-cancer network analysis identifies combinations of rare somatic mutations across pathways and protein complexes.
Leiserson MD, Vandin F, Wu HT, Dobson JR, Eldridge JV, Thomas JL, Papoutsaki A, Kim Y, Niu B, McLellan M, Lawrence MS, Gonzalez-Perez A, Tamborero D, Cheng Y, Ryslik GA, Lopez-Bigas N, Getz G, Ding L, Raphael BJ. Leiserson MD, et al. Among authors: vandin f. Nat Genet. 2015 Feb;47(2):106-14. doi: 10.1038/ng.3168. Epub 2014 Dec 15. Nat Genet. 2015. PMID: 25501392 Free PMC article.
40 results