Vangaveti S - Search Results

1

A Structural Basis for Restricted Codon Recognition Mediated by 2-thiocytidine in tRNA Containing a Wobble Position Inosine.

Vangaveti S, Cantara WA, Spears JL, DeMirci H, Murphy FV 4th, Ranganathan SV, Sarachan KL, Agris PF. Vangaveti S, et al. J Mol Biol. 2020 Feb 14;432(4):913-929. doi: 10.1016/j.jmb.2019.12.016. Epub 2020 Jan 14. J Mol Biol. 2020. PMID: 31945376 Free PMC article.

2

Celebrating wobble decoding: Half a century and still much is new.

Agris PF, Eruysal ER, Narendran A, Väre VYP, Vangaveti S, Ranganathan SV. Agris PF, et al. Among authors: vangaveti s. RNA Biol. 2018;15(4-5):537-553. doi: 10.1080/15476286.2017.1356562. Epub 2017 Sep 21. RNA Biol. 2018. PMID: 28812932 Free PMC article. Review.

3

Silencing of the tRNA Modification Enzyme Cdkal1 Effects Functional Insulin Synthesis in NIT-1 Cells: tRNA^Lys3 Lacking ms²- (ms²t⁶A₃₇) is Unable to Establish Sufficient Anticodon:Codon Interactions to Decode the Wobble Codon AAG.

Narendran A, Vangaveti S, Ranganathan SV, Eruysal E, Craft M, Alrifai O, Chua FY, Sarachan K, Litwa B, Ramachandran S, Agris PF. Narendran A, et al. Among authors: vangaveti s. Front Mol Biosci. 2021 Feb 9;7:584228. doi: 10.3389/fmolb.2020.584228. eCollection 2020. Front Mol Biosci. 2021. PMID: 33634165 Free PMC article.

4

Physical Chemistry of a Single tRNA-Modified Nucleoside Regulates Decoding of the Synonymous Lysine Wobble Codon and Affects Type 2 Diabetes.

Vangaveti S, Ranganathan SV, Agris PF. Vangaveti S, et al. J Phys Chem B. 2022 Feb 17;126(6):1168-1177. doi: 10.1021/acs.jpcb.1c09053. Epub 2022 Feb 4. J Phys Chem B. 2022. PMID: 35119848

5

Modification of messenger RNA by 2'-O-methylation regulates gene expression in vivo.

Elliott BA, Ho HT, Ranganathan SV, Vangaveti S, Ilkayeva O, Abou Assi H, Choi AK, Agris PF, Holley CL. Elliott BA, et al. Among authors: vangaveti s. Nat Commun. 2019 Jul 30;10(1):3401. doi: 10.1038/s41467-019-11375-7. Nat Commun. 2019. PMID: 31363086 Free PMC article.

6

A coarse-grained model for assisting the investigation of structure and dynamics of large nucleic acids by ion mobility spectrometry-mass spectrometry.

Vangaveti S, D'Esposito RJ, Lippens JL, Fabris D, Ranganathan SV. Vangaveti S, et al. Phys Chem Chem Phys. 2017 Jun 14;19(23):14937-14946. doi: 10.1039/c7cp00717e. Phys Chem Chem Phys. 2017. PMID: 28374022 Free PMC article.

7

Nature's Selection of Geranyl Group as a tRNA Modification: The Effects of Chain Length on Base-Pairing Specificity.

Haruehanroengra P, Vangaveti S, Ranganathan SV, Wang R, Chen A, Sheng J. Haruehanroengra P, et al. Among authors: vangaveti s. ACS Chem Biol. 2017 Jun 16;12(6):1504-1513. doi: 10.1021/acschembio.7b00108. Epub 2017 Apr 18. ACS Chem Biol. 2017. PMID: 28418649

8

Synthesis, base pairing and structure studies of geranylated RNA.

Wang R, Vangaveti S, Ranganathan SV, Basanta-Sanchez M, Haruehanroengra P, Chen A, Sheng J. Wang R, et al. Among authors: vangaveti s. Nucleic Acids Res. 2016 Jul 27;44(13):6036-45. doi: 10.1093/nar/gkw544. Epub 2016 Jun 15. Nucleic Acids Res. 2016. PMID: 27307604 Free PMC article.

9

Challenges with Simulating Modified RNA: Insights into Role and Reciprocity of Experimental and Computational Approaches.

D'Esposito RJ, Myers CA, Chen AA, Vangaveti S. D'Esposito RJ, et al. Among authors: vangaveti s. Genes (Basel). 2022 Mar 18;13(3):540. doi: 10.3390/genes13030540. Genes (Basel). 2022. PMID: 35328093 Free PMC article. Review.

10

Structural and Binding Effects of Chemical Modifications on Thrombin Binding Aptamer (TBA).

Valsangkar V, Vangaveti S, Lee GW, Fahssi WM, Awan WS, Huang Y, Chen AA, Sheng J. Valsangkar V, et al. Among authors: vangaveti s. Molecules. 2021 Jul 30;26(15):4620. doi: 10.3390/molecules26154620. Molecules. 2021. PMID: 34361773 Free PMC article.

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