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TADtool: visual parameter identification for TAD-calling algorithms.
Kruse K, Hug CB, Hernández-Rodríguez B, Vaquerizas JM. Kruse K, et al. Among authors: vaquerizas jm. Bioinformatics. 2016 Oct 15;32(20):3190-3192. doi: 10.1093/bioinformatics/btw368. Epub 2016 Jun 17. Bioinformatics. 2016. PMID: 27318199 Free PMC article.
A molecular roadmap for the emergence of early-embryonic-like cells in culture.
Rodriguez-Terrones D, Gaume X, Ishiuchi T, Weiss A, Kopp A, Kruse K, Penning A, Vaquerizas JM, Brino L, Torres-Padilla ME. Rodriguez-Terrones D, et al. Among authors: vaquerizas jm. Nat Genet. 2018 Jan;50(1):106-119. doi: 10.1038/s41588-017-0016-5. Epub 2017 Dec 18. Nat Genet. 2018. PMID: 29255263 Free PMC article.
Cohesin Disrupts Polycomb-Dependent Chromosome Interactions in Embryonic Stem Cells.
Rhodes JDP, Feldmann A, Hernández-Rodríguez B, Díaz N, Brown JM, Fursova NA, Blackledge NP, Prathapan P, Dobrinic P, Huseyin MK, Szczurek A, Kruse K, Nasmyth KA, Buckle VJ, Vaquerizas JM, Klose RJ. Rhodes JDP, et al. Among authors: vaquerizas jm. Cell Rep. 2020 Jan 21;30(3):820-835.e10. doi: 10.1016/j.celrep.2019.12.057. Cell Rep. 2020. PMID: 31968256 Free PMC article.
Heterochromatin establishment during early mammalian development is regulated by pericentromeric RNA and characterized by non-repressive H3K9me3.
Burton A, Brochard V, Galan C, Ruiz-Morales ER, Rovira Q, Rodriguez-Terrones D, Kruse K, Le Gras S, Udayakumar VS, Chin HG, Eid A, Liu X, Wang C, Gao S, Pradhan S, Vaquerizas JM, Beaujean N, Jenuwein T, Torres-Padilla ME. Burton A, et al. Among authors: vaquerizas jm. Nat Cell Biol. 2020 Jul;22(7):767-778. doi: 10.1038/s41556-020-0536-6. Epub 2020 Jun 29. Nat Cell Biol. 2020. PMID: 32601371 Free PMC article.
65 results