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Understanding and Editing the Zebrafish Genome.
Varshney GK, Sood R, Burgess SM. Varshney GK, et al. Adv Genet. 2015;92:1-52. doi: 10.1016/bs.adgen.2015.09.002. Epub 2015 Nov 12. Adv Genet. 2015. PMID: 26639914 Review.
GATA2 controls lymphatic endothelial cell junctional integrity and lymphovenous valve morphogenesis through miR-126.
Mahamud MR, Geng X, Ho YC, Cha B, Kim Y, Ma J, Chen L, Myers G, Camper S, Mustacich D, Witte M, Choi D, Hong YK, Chen H, Varshney G, Engel JD, Wang S, Kim TH, Lim KC, Srinivasan RS. Mahamud MR, et al. Development. 2019 Nov 5;146(21):dev184218. doi: 10.1242/dev.184218. Development. 2019. PMID: 31582413 Free PMC article.
The Zebrafish Insertion Collection (ZInC): a web based, searchable collection of zebrafish mutations generated by DNA insertion.
Varshney GK, Huang H, Zhang S, Lu J, Gildea DE, Yang Z, Wolfsberg TG, Lin S, Burgess SM. Varshney GK, et al. Nucleic Acids Res. 2013 Jan;41(Database issue):D861-4. doi: 10.1093/nar/gks946. Epub 2012 Nov 24. Nucleic Acids Res. 2013. PMID: 23180778 Free PMC article.
A large-scale zebrafish gene knockout resource for the genome-wide study of gene function.
Varshney GK, Lu J, Gildea DE, Huang H, Pei W, Yang Z, Huang SC, Schoenfeld D, Pho NH, Casero D, Hirase T, Mosbrook-Davis D, Zhang S, Jao LE, Zhang B, Woods IG, Zimmerman S, Schier AF, Wolfsberg TG, Pellegrini M, Burgess SM, Lin S. Varshney GK, et al. Genome Res. 2013 Apr;23(4):727-35. doi: 10.1101/gr.151464.112. Epub 2013 Feb 4. Genome Res. 2013. PMID: 23382537 Free PMC article.
A defined zebrafish line for high-throughput genetics and genomics: NHGRI-1.
LaFave MC, Varshney GK, Vemulapalli M, Mullikin JC, Burgess SM. LaFave MC, et al. Genetics. 2014 Sep;198(1):167-70. doi: 10.1534/genetics.114.166769. Epub 2014 Jul 9. Genetics. 2014. PMID: 25009150 Free PMC article.
Long-term correction of Sandhoff disease following intravenous delivery of rAAV9 to mouse neonates.
Walia JS, Altaleb N, Bello A, Kruck C, LaFave MC, Varshney GK, Burgess SM, Chowdhury B, Hurlbut D, Hemming R, Kobinger GP, Triggs-Raine B. Walia JS, et al. Mol Ther. 2015 Mar;23(3):414-22. doi: 10.1038/mt.2014.240. Epub 2014 Dec 17. Mol Ther. 2015. PMID: 25515709 Free PMC article.
Phenotype-driven chemical screening in zebrafish for compounds that inhibit collective cell migration identifies multiple pathways potentially involved in metastatic invasion.
Gallardo VE, Varshney GK, Lee M, Bupp S, Xu L, Shinn P, Crawford NP, Inglese J, Burgess SM. Gallardo VE, et al. Dis Model Mech. 2015 Jun;8(6):565-76. doi: 10.1242/dmm.018689. Epub 2015 Mar 25. Dis Model Mech. 2015. PMID: 25810455 Free PMC article.
A Multifunctional Mutagenesis System for Analysis of Gene Function in Zebrafish.
Quach HN, Tao S, Vrljicak P, Joshi A, Ruan H, Sukumaran R, Varshney GK, LaFave MC; Ds Screen Team, Burgess SM, Winkler C, Emelyanov A, Parinov S, Sampath K. Quach HN, et al. G3 (Bethesda). 2015 Apr 2;5(6):1283-99. doi: 10.1534/g3.114.015842. G3 (Bethesda). 2015. PMID: 25840430 Free PMC article.
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