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Year Number of Results
2014 2
2015 2
2016 3
2017 1
2018 5
2019 5
2020 4
2021 5
2022 8
2023 7
2024 6

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46 results

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Page 1
Genomic epidemiology reveals 2022 mpox epidemic in New York City governed by heavy-tailed sexual contact networks.
Pekar JE, Wang Y, Wang JC, Shao Y, Taki F, Forgione LA, Amin H, Clabby T, Johnson K, Torian LV, Braunstein SL, Pathela P, Omoregie E, Hughes S, Suchard MA, Vasylyeva TI, Lemey P, Wertheim JO. Pekar JE, et al. Among authors: vasylyeva ti. medRxiv [Preprint]. 2024 Aug 1:2024.07.30.24311083. doi: 10.1101/2024.07.30.24311083. medRxiv. 2024. PMID: 39132479 Free PMC article. Preprint.
HIV-1 transmission dynamics among people who inject drugs on the US/Mexico border during the COVID-19 pandemic: a prosepective cohort study.
Skaathun B, Strathdee SA, Shrader CH, Nacht CL, Borquez A, Artamonova I, Harvey-Vera A, Vera CF, Rangel G, Ignacio C, Woodworth B, Chaillon A, Vasylyeva TI. Skaathun B, et al. Among authors: vasylyeva ti. Lancet Reg Health Am. 2024 Apr 30;33:100751. doi: 10.1016/j.lana.2024.100751. eCollection 2024 May. Lancet Reg Health Am. 2024. PMID: 38711788 Free PMC article.
Integrated Genomic and Social Network Analyses of SARS-CoV-2 Transmission in the Healthcare Setting.
Keehner J, Abeles SR, Longhurst CA, Horton LE, Myers FE, Riggs-Rodriguez L, Ahmad M, Baxter S, Boussina A, Cantrell K, Cardenas P, De Hoff P, El-Kareh R, Holland J, Ikeda D, Kurashige K, Laurent LC; SEARCH Alliance; Lucas A, Pride D, Sathe S, Tran AR, Vasylyeva TI, Yeo G, Knight R, Wertheim JO, Torriani FJ. Keehner J, et al. Among authors: vasylyeva ti. Clin Infect Dis. 2024 May 15;78(5):1204-1213. doi: 10.1093/cid/ciad738. Clin Infect Dis. 2024. PMID: 38227643
Scalable gradients enable Hamiltonian Monte Carlo sampling for phylodynamic inference under episodic birth-death-sampling models.
Shao Y, Magee AF, Vasylyeva TI, Suchard MA. Shao Y, et al. Among authors: vasylyeva ti. bioRxiv [Preprint]. 2023 Nov 2:2023.10.31.564882. doi: 10.1101/2023.10.31.564882. bioRxiv. 2023. Update in: PLoS Comput Biol. 2024 Mar 29;20(3):e1011640. doi: 10.1371/journal.pcbi.1011640. PMID: 37961423 Free PMC article. Updated. Preprint.
The recency and geographical origins of the bat viruses ancestral to SARS-CoV and SARS-CoV-2.
Pekar JE, Lytras S, Ghafari M, Magee AF, Parker E, Havens JL, Katzourakis A, Vasylyeva TI, Suchard MA, Hughes AC, Hughes J, Robertson DL, Dellicour S, Worobey M, Wertheim JO, Lemey P. Pekar JE, et al. Among authors: vasylyeva ti. bioRxiv [Preprint]. 2023 Jul 12:2023.07.12.548617. doi: 10.1101/2023.07.12.548617. bioRxiv. 2023. PMID: 37502985 Free PMC article. Preprint.
Hepatitis C Virus in people with experience of injection drug use following their displacement to Southern Ukraine before 2020.
Yakovleva A, Kovalenko G, Redlinger M, Smyrnov P, Tymets O, Korobchuk A, Kotlyk L, Kolodiazieva A, Podolina A, Cherniavska S, Antonenko P, Strathdee SA, Friedman SR, Goodfellow I, Wertheim JO, Bortz E, Meredith L, Vasylyeva TI. Yakovleva A, et al. Among authors: vasylyeva ti. BMC Infect Dis. 2023 Jul 3;23(1):446. doi: 10.1186/s12879-023-08423-5. BMC Infect Dis. 2023. PMID: 37400776 Free PMC article.
46 results