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A burst of segmental duplications in the genome of the African great ape ancestor.
Marques-Bonet T, Kidd JM, Ventura M, Graves TA, Cheng Z, Hillier LW, Jiang Z, Baker C, Malfavon-Borja R, Fulton LA, Alkan C, Aksay G, Girirajan S, Siswara P, Chen L, Cardone MF, Navarro A, Mardis ER, Wilson RK, Eichler EE. Marques-Bonet T, et al. Among authors: ventura m. Nature. 2009 Feb 12;457(7231):877-81. doi: 10.1038/nature07744. Nature. 2009. PMID: 19212409 Free PMC article.
Using a pericentromeric interspersed repeat to recapitulate the phylogeny and expansion of human centromeric segmental duplications.
Horvath JE, Gulden CL, Bailey JA, Yohn C, McPherson JD, Prescott A, Roe BA, de Jong PJ, Ventura M, Misceo D, Archidiacono N, Zhao S, Schwartz S, Rocchi M, Eichler EE. Horvath JE, et al. Among authors: ventura m. Mol Biol Evol. 2003 Sep;20(9):1463-79. doi: 10.1093/molbev/msg158. Epub 2003 May 30. Mol Biol Evol. 2003. PMID: 12777517
Recurrent sites for new centromere seeding.
Ventura M, Weigl S, Carbone L, Cardone MF, Misceo D, Teti M, D'Addabbo P, Wandall A, Björck E, de Jong PJ, She X, Eichler EE, Archidiacono N, Rocchi M. Ventura M, et al. Genome Res. 2004 Sep;14(9):1696-703. doi: 10.1101/gr.2608804. Genome Res. 2004. PMID: 15342555 Free PMC article.
Punctuated duplication seeding events during the evolution of human chromosome 2p11.
Horvath JE, Gulden CL, Vallente RU, Eichler MY, Ventura M, McPherson JD, Graves TA, Wilson RK, Schwartz S, Rocchi M, Eichler EE. Horvath JE, et al. Among authors: ventura m. Genome Res. 2005 Jul;15(7):914-27. doi: 10.1101/gr.3916405. Epub 2005 Jun 17. Genome Res. 2005. PMID: 15965031 Free PMC article.
A genome-wide survey of structural variation between human and chimpanzee.
Newman TL, Tuzun E, Morrison VA, Hayden KE, Ventura M, McGrath SD, Rocchi M, Eichler EE. Newman TL, et al. Among authors: ventura m. Genome Res. 2005 Oct;15(10):1344-56. doi: 10.1101/gr.4338005. Epub 2005 Sep 16. Genome Res. 2005. PMID: 16169929 Free PMC article.
A preliminary comparative analysis of primate segmental duplications shows elevated substitution rates and a great-ape expansion of intrachromosomal duplications.
She X, Liu G, Ventura M, Zhao S, Misceo D, Roberto R, Cardone MF, Rocchi M; NISC Comparative Sequencing Program; Green ED, Archidiacano N, Eichler EE. She X, et al. Among authors: ventura m. Genome Res. 2006 May;16(5):576-83. doi: 10.1101/gr.4949406. Epub 2006 Apr 10. Genome Res. 2006. PMID: 16606706 Free PMC article.
1,676 results