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On-line resources for bacterial micro-evolution studies using MLVA or CRISPR typing.
Grissa I, Bouchon P, Pourcel C, Vergnaud G. Grissa I, et al. Among authors: vergnaud g. Biochimie. 2008 Apr;90(4):660-8. doi: 10.1016/j.biochi.2007.07.014. Epub 2007 Jul 28. Biochimie. 2008. PMID: 17822824 Review.
Linkage and physical mapping of rat microsatellites derived from minisatellite loci.
Giraudeau F, Apiou F, Amarger V, Kaisaki PJ, Bihoreau MT, Lathrop M, Vergnaud G, Gauguier D. Giraudeau F, et al. Among authors: vergnaud g. Mamm Genome. 1999 Apr;10(4):405-9. doi: 10.1007/s003359901012. Mamm Genome. 1999. PMID: 10087303 No abstract available.
Minisatellites: mutability and genome architecture.
Vergnaud G, Denoeud F. Vergnaud G, et al. Genome Res. 2000 Jul;10(7):899-907. doi: 10.1101/gr.10.7.899. Genome Res. 2000. PMID: 10899139 Review.
A tandem repeats database for bacterial genomes: application to the genotyping of Yersinia pestis and Bacillus anthracis.
Le Flèche P, Hauck Y, Onteniente L, Prieur A, Denoeud F, Ramisse V, Sylvestre P, Benson G, Ramisse F, Vergnaud G. Le Flèche P, et al. Among authors: vergnaud g. BMC Microbiol. 2001;1:2. doi: 10.1186/1471-2180-1-2. Epub 2001 Mar 30. BMC Microbiol. 2001. PMID: 11299044 Free PMC article.
High resolution, on-line identification of strains from the Mycobacterium tuberculosis complex based on tandem repeat typing.
Le Flèche P, Fabre M, Denoeud F, Koeck JL, Vergnaud G. Le Flèche P, et al. Among authors: vergnaud g. BMC Microbiol. 2002 Nov 27;2:37. doi: 10.1186/1471-2180-2-37. Epub 2002 Nov 27. BMC Microbiol. 2002. PMID: 12456266 Free PMC article.
Characterization of a tandem repeat polymorphism in Legionella pneumophila and its use for genotyping.
Pourcel C, Vidgop Y, Ramisse F, Vergnaud G, Tram C. Pourcel C, et al. Among authors: vergnaud g. J Clin Microbiol. 2003 May;41(5):1819-26. doi: 10.1128/jcm.41.5.1819-1826.2003. J Clin Microbiol. 2003. PMID: 12734211 Free PMC article.
Evaluation of the polymorphisms associated with tandem repeats for Pseudomonas aeruginosa strain typing.
Onteniente L, Brisse S, Tassios PT, Vergnaud G. Onteniente L, et al. Among authors: vergnaud g. J Clin Microbiol. 2003 Nov;41(11):4991-7. doi: 10.1128/jcm.41.11.4991-4997.2003. J Clin Microbiol. 2003. PMID: 14605129 Free PMC article.
Identification of polymorphic tandem repeats by direct comparison of genome sequence from different bacterial strains: a web-based resource.
Denoeud F, Vergnaud G. Denoeud F, et al. Among authors: vergnaud g. BMC Bioinformatics. 2004 Jan 12;5:4. doi: 10.1186/1471-2105-5-4. BMC Bioinformatics. 2004. PMID: 14715089 Free PMC article.
Tandem repeats analysis for the high resolution phylogenetic analysis of Yersinia pestis.
Pourcel C, André-Mazeaud F, Neubauer H, Ramisse F, Vergnaud G. Pourcel C, et al. Among authors: vergnaud g. BMC Microbiol. 2004 Jun 8;4:22. doi: 10.1186/1471-2180-4-22. BMC Microbiol. 2004. PMID: 15186506 Free PMC article.
Variable number of tandem repeats in Salmonella enterica subsp. enterica for typing purposes.
Ramisse V, Houssu P, Hernandez E, Denoeud F, Hilaire V, Lisanti O, Ramisse F, Cavallo JD, Vergnaud G. Ramisse V, et al. Among authors: vergnaud g. J Clin Microbiol. 2004 Dec;42(12):5722-30. doi: 10.1128/JCM.42.12.5722-5730.2004. J Clin Microbiol. 2004. PMID: 15583305 Free PMC article.
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