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Molecular sensing by the aptamer domain of the FMN riboswitch: a general model for ligand binding by conformational selection.
Vicens Q, Mondragón E, Batey RT. Vicens Q, et al. Nucleic Acids Res. 2011 Oct;39(19):8586-98. doi: 10.1093/nar/gkr565. Epub 2011 Jul 10. Nucleic Acids Res. 2011. PMID: 21745821 Free PMC article.
Crystal structures of complexes between aminoglycosides and decoding A site oligonucleotides: role of the number of rings and positive charges in the specific binding leading to miscoding.
François B, Russell RJ, Murray JB, Aboul-ela F, Masquida B, Vicens Q, Westhof E. François B, et al. Among authors: vicens q. Nucleic Acids Res. 2005 Oct 7;33(17):5677-90. doi: 10.1093/nar/gki862. Print 2005. Nucleic Acids Res. 2005. PMID: 16214802 Free PMC article.
Atomic level architecture of group I introns revealed.
Vicens Q, Cech TR. Vicens Q, et al. Trends Biochem Sci. 2006 Jan;31(1):41-51. doi: 10.1016/j.tibs.2005.11.008. Epub 2005 Dec 13. Trends Biochem Sci. 2006. PMID: 16356725 Review.
Local RNA structural changes induced by crystallization are revealed by SHAPE.
Vicens Q, Gooding AR, Laederach A, Cech TR. Vicens Q, et al. RNA. 2007 Apr;13(4):536-48. doi: 10.1261/rna.400207. Epub 2007 Feb 13. RNA. 2007. PMID: 17299128 Free PMC article.
Toward predicting self-splicing and protein-facilitated splicing of group I introns.
Vicens Q, Paukstelis PJ, Westhof E, Lambowitz AM, Cech TR. Vicens Q, et al. RNA. 2008 Oct;14(10):2013-29. doi: 10.1261/rna.1027208. Epub 2008 Sep 3. RNA. 2008. PMID: 18768647 Free PMC article.
Preparation of group I introns for biochemical studies and crystallization assays by native affinity purification.
Vicens Q, Gooding AR, Duarte LF, Batey RT. Vicens Q, et al. PLoS One. 2009 Aug 27;4(8):e6740. doi: 10.1371/journal.pone.0006740. PLoS One. 2009. PMID: 19710925 Free PMC article.
'Z-DNA like' fragments in RNA: a recurring structural motif with implications for folding, RNA/protein recognition and immune response.
D'Ascenzo L, Leonarski F, Vicens Q, Auffinger P. D'Ascenzo L, et al. Among authors: vicens q. Nucleic Acids Res. 2016 Jul 8;44(12):5944-56. doi: 10.1093/nar/gkw388. Epub 2016 May 5. Nucleic Acids Res. 2016. PMID: 27151194 Free PMC article.
Structure of the 70S ribosome from human pathogen Staphylococcus aureus.
Khusainov I, Vicens Q, Bochler A, Grosse F, Myasnikov A, Ménétret JF, Chicher J, Marzi S, Romby P, Yusupova G, Yusupov M, Hashem Y. Khusainov I, et al. Among authors: vicens q. Nucleic Acids Res. 2016 Dec 1;44(21):10491-10504. doi: 10.1093/nar/gkw933. Epub 2016 Oct 18. Nucleic Acids Res. 2016. PMID: 27906650 Free PMC article.
The IRES5'UTR of the dicistrovirus cricket paralysis virus is a type III IRES containing an essential pseudoknot structure.
Gross L, Vicens Q, Einhorn E, Noireterre A, Schaeffer L, Kuhn L, Imler JL, Eriani G, Meignin C, Martin F. Gross L, et al. Among authors: vicens q. Nucleic Acids Res. 2017 Sep 6;45(15):8993-9004. doi: 10.1093/nar/gkx622. Nucleic Acids Res. 2017. PMID: 28911115 Free PMC article.
Identification of receptors for UNCG and GNRA Z-turns and their occurrence in rRNA.
D'Ascenzo L, Vicens Q, Auffinger P. D'Ascenzo L, et al. Among authors: vicens q. Nucleic Acids Res. 2018 Sep 6;46(15):7989-7997. doi: 10.1093/nar/gky578. Nucleic Acids Res. 2018. PMID: 29986118 Free PMC article.
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