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A tissue-specific atlas of mouse protein phosphorylation and expression.
Huttlin EL, Jedrychowski MP, Elias JE, Goswami T, Rad R, Beausoleil SA, Villén J, Haas W, Sowa ME, Gygi SP. Huttlin EL, et al. Cell. 2010 Dec 23;143(7):1174-89. doi: 10.1016/j.cell.2010.12.001. Cell. 2010. PMID: 21183079 Free PMC article.
R2-P2 rapid-robotic phosphoproteomics enables multidimensional cell signaling studies.
Leutert M, Rodríguez-Mias RA, Fukuda NK, Villén J. Leutert M, et al. Among authors: villen j. Mol Syst Biol. 2019 Dec;15(12):e9021. doi: 10.15252/msb.20199021. Mol Syst Biol. 2019. PMID: 31885202 Free PMC article.
Thesaurus: quantifying phosphopeptide positional isomers.
Searle BC, Lawrence RT, MacCoss MJ, Villén J. Searle BC, et al. Among authors: villen j. Nat Methods. 2019 Aug;16(8):703-706. doi: 10.1038/s41592-019-0498-4. Epub 2019 Jul 29. Nat Methods. 2019. PMID: 31363206 Free PMC article.
Proteome and Phosphoproteome Analysis of Brown Adipocytes Reveals That RICTOR Loss Dampens Global Insulin/AKT Signaling.
Entwisle SW, Martinez Calejman C, Valente AS, Lawrence RT, Hung CM, Guertin DA, Villén J. Entwisle SW, et al. Among authors: villen j. Mol Cell Proteomics. 2020 Jul;19(7):1104-1119. doi: 10.1074/mcp.RA120.001946. Epub 2020 Mar 31. Mol Cell Proteomics. 2020. PMID: 32234964
Large-scale characterization of HeLa cell nuclear phosphoproteins.
Beausoleil SA, Jedrychowski M, Schwartz D, Elias JE, Villén J, Li J, Cohn MA, Cantley LC, Gygi SP. Beausoleil SA, et al. Proc Natl Acad Sci U S A. 2004 Aug 17;101(33):12130-5. doi: 10.1073/pnas.0404720101. Epub 2004 Aug 9. Proc Natl Acad Sci U S A. 2004. PMID: 15302935 Free PMC article.
Phosphoproteomic analysis of the developing mouse brain.
Ballif BA, Villén J, Beausoleil SA, Schwartz D, Gygi SP. Ballif BA, et al. Mol Cell Proteomics. 2004 Nov;3(11):1093-101. doi: 10.1074/mcp.M400085-MCP200. Epub 2004 Sep 2. Mol Cell Proteomics. 2004. PMID: 15345747
Optimization and use of peptide mass measurement accuracy in shotgun proteomics.
Haas W, Faherty BK, Gerber SA, Elias JE, Beausoleil SA, Bakalarski CE, Li X, Villén J, Gygi SP. Haas W, et al. Mol Cell Proteomics. 2006 Jul;5(7):1326-37. doi: 10.1074/mcp.M500339-MCP200. Epub 2006 Apr 23. Mol Cell Proteomics. 2006. PMID: 16635985
A conserved MST-FOXO signaling pathway mediates oxidative-stress responses and extends life span.
Lehtinen MK, Yuan Z, Boag PR, Yang Y, Villén J, Becker EB, DiBacco S, de la Iglesia N, Gygi S, Blackwell TK, Bonni A. Lehtinen MK, et al. Cell. 2006 Jun 2;125(5):987-1001. doi: 10.1016/j.cell.2006.03.046. Cell. 2006. PMID: 16751106
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