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SWR-C and INO80 chromatin remodelers recognize nucleosome-free regions near +1 nucleosomes.
Yen K, Vinayachandran V, Pugh BF. Yen K, et al. Among authors: vinayachandran v. Cell. 2013 Sep 12;154(6):1246-56. doi: 10.1016/j.cell.2013.08.043. Cell. 2013. PMID: 24034248 Free PMC article.
Nucleosome positioning in relation to nucleosome spacing and DNA sequence-specific binding of a protein.
Pusarla RH, Vinayachandran V, Bhargava P. Pusarla RH, et al. Among authors: vinayachandran v. FEBS J. 2007 May;274(9):2396-410. doi: 10.1111/j.1742-4658.2007.05775.x. Epub 2007 Apr 5. FEBS J. 2007. PMID: 17419736
Genome-wide nucleosome specificity and directionality of chromatin remodelers.
Yen K, Vinayachandran V, Batta K, Koerber RT, Pugh BF. Yen K, et al. Among authors: vinayachandran v. Cell. 2012 Jun 22;149(7):1461-73. doi: 10.1016/j.cell.2012.04.036. Cell. 2012. PMID: 22726434 Free PMC article.
The Nuclear Pore-Associated TREX-2 Complex Employs Mediator to Regulate Gene Expression.
Schneider M, Hellerschmied D, Schubert T, Amlacher S, Vinayachandran V, Reja R, Pugh BF, Clausen T, Köhler A. Schneider M, et al. Among authors: vinayachandran v. Cell. 2015 Aug 27;162(5):1016-28. doi: 10.1016/j.cell.2015.07.059. Cell. 2015. PMID: 26317468 Free PMC article.
Molecular mechanisms of ribosomal protein gene coregulation.
Reja R, Vinayachandran V, Ghosh S, Pugh BF. Reja R, et al. Among authors: vinayachandran v. Genes Dev. 2015 Sep 15;29(18):1942-54. doi: 10.1101/gad.268896.115. Genes Dev. 2015. PMID: 26385964 Free PMC article.
Genome-Wide Organization of GATA1 and TAL1 Determined at High Resolution.
Han GC, Vinayachandran V, Bataille AR, Park B, Chan-Salis KY, Keller CA, Long M, Mahony S, Hardison RC, Pugh BF. Han GC, et al. Among authors: vinayachandran v. Mol Cell Biol. 2015 Oct 26;36(1):157-72. doi: 10.1128/MCB.00806-15. Print 2016 Jan 1. Mol Cell Biol. 2015. PMID: 26503782 Free PMC article.
Structural evidence for Nap1-dependent H2A-H2B deposition and nucleosome assembly.
Aguilar-Gurrieri C, Larabi A, Vinayachandran V, Patel NA, Yen K, Reja R, Ebong IO, Schoehn G, Robinson CV, Pugh BF, Panne D. Aguilar-Gurrieri C, et al. Among authors: vinayachandran v. EMBO J. 2016 Jul 1;35(13):1465-82. doi: 10.15252/embj.201694105. Epub 2016 May 25. EMBO J. 2016. PMID: 27225933 Free PMC article.
The Histone Modification Domain of Paf1 Complex Subunit Rtf1 Directly Stimulates H2B Ubiquitylation through an Interaction with Rad6.
Van Oss SB, Shirra MK, Bataille AR, Wier AD, Yen K, Vinayachandran V, Byeon IL, Cucinotta CE, Héroux A, Jeon J, Kim J, VanDemark AP, Pugh BF, Arndt KM. Van Oss SB, et al. Among authors: vinayachandran v. Mol Cell. 2016 Nov 17;64(4):815-825. doi: 10.1016/j.molcel.2016.10.008. Epub 2016 Nov 10. Mol Cell. 2016. PMID: 27840029 Free PMC article.
Widespread and precise reprogramming of yeast protein-genome interactions in response to heat shock.
Vinayachandran V, Reja R, Rossi MJ, Park B, Rieber L, Mittal C, Mahony S, Pugh BF. Vinayachandran V, et al. Genome Res. 2018 Feb 14;28(3):357-66. doi: 10.1101/gr.226761.117. Online ahead of print. Genome Res. 2018. PMID: 29444801 Free PMC article.
The SAGA/TREX-2 subunit Sus1 binds widely to transcribed genes and affects mRNA turnover globally.
García-Molinero V, García-Martínez J, Reja R, Furió-Tarí P, Antúnez O, Vinayachandran V, Conesa A, Pugh BF, Pérez-Ortín JE, Rodríguez-Navarro S. García-Molinero V, et al. Among authors: vinayachandran v. Epigenetics Chromatin. 2018 Mar 29;11(1):13. doi: 10.1186/s13072-018-0184-2. Epigenetics Chromatin. 2018. PMID: 29598828 Free PMC article.
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