Waddell PJ - Search Results

1

Effects of DNA methylation on nucleosome stability.

Collings CK, Waddell PJ, Anderson JN. Collings CK, et al. Among authors: waddell pj. Nucleic Acids Res. 2013 Mar 1;41(5):2918-31. doi: 10.1093/nar/gks893. Epub 2013 Jan 25. Nucleic Acids Res. 2013. PMID: 23355616 Free PMC article.

2

Measuring fit of sequence data to phylogenetic model: gain of power using marginal tests.

Waddell PJ, Ota R, Penny D. Waddell PJ, et al. J Mol Evol. 2009 Oct;69(4):289-99. doi: 10.1007/s00239-009-9268-8. Epub 2009 Oct 23. J Mol Evol. 2009. PMID: 19851702

3

Structure of Penaeus stylirostris densovirus, a shrimp pathogen.

Kaufmann B, Bowman VD, Li Y, Szelei J, Waddell PJ, Tijssen P, Rossmann MG. Kaufmann B, et al. Among authors: waddell pj. J Virol. 2010 Nov;84(21):11289-96. doi: 10.1128/JVI.01240-10. Epub 2010 Aug 11. J Virol. 2010. PMID: 20702621 Free PMC article.

4

Potential Mechanisms for Cancer Resistance in Elephants and Comparative Cellular Response to DNA Damage in Humans.

Abegglen LM, Caulin AF, Chan A, Lee K, Robinson R, Campbell MS, Kiso WK, Schmitt DL, Waddell PJ, Bhaskara S, Jensen ST, Maley CC, Schiffman JD. Abegglen LM, et al. Among authors: waddell pj. JAMA. 2015 Nov 3;314(17):1850-60. doi: 10.1001/jama.2015.13134. JAMA. 2015. PMID: 26447779 Free PMC article.

5

Phylogenetic methodology for detecting protein interactions.

Waddell PJ, Kishino H, Ota R. Waddell PJ, et al. Mol Biol Evol. 2007 Mar;24(3):650-9. doi: 10.1093/molbev/msl193. Epub 2006 Dec 8. Mol Biol Evol. 2007. PMID: 17158779

6

Very fast algorithms for evaluating the stability of ML and Bayesian phylogenetic trees from sequence data.

Waddell PJ, Kishino H, Ota R. Waddell PJ, et al. Genome Inform. 2002;13:82-92. Genome Inform. 2002. PMID: 14571377

7

Measuring the fit of sequence data to phylogenetic model: allowing for missing data.

Waddell PJ. Waddell PJ. Mol Biol Evol. 2005 Mar;22(3):395-401. doi: 10.1093/molbev/msi002. Epub 2004 Oct 6. Mol Biol Evol. 2005. PMID: 15470228

8

LINE-1 elements: analysis by fluorescence in-situ hybridization and nucleotide sequences.

Waters PD, Dobigny G, Waddell PJ, Robinson TJ. Waters PD, et al. Among authors: waddell pj. Methods Mol Biol. 2008;422:227-37. doi: 10.1007/978-1-59745-581-7_14. Methods Mol Biol. 2008. PMID: 18629670

9

Evaluating placental inter-ordinal phylogenies with novel sequences including RAG1, gamma-fibrinogen, ND6, and mt-tRNA, plus MCMC-driven nucleotide, amino acid, and codon models.

Waddell PJ, Shelley S. Waddell PJ, et al. Mol Phylogenet Evol. 2003 Aug;28(2):197-224. doi: 10.1016/s1055-7903(03)00115-5. Mol Phylogenet Evol. 2003. PMID: 12878459

10

Rapid evaluation of the phylogenetic congruence of sequence data using likelihood ratio tests.

Waddell PJ, Kishino H, Ota R. Waddell PJ, et al. Mol Biol Evol. 2000 Dec;17(12):1988-92. doi: 10.1093/oxfordjournals.molbev.a026300. Mol Biol Evol. 2000. PMID: 11110915 No abstract available.

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