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Prediction of functional tertiary interactions and intermolecular interfaces from primary sequence data.
Pang PS, Jankowsky E, Wadley LM, Pyle AM. Pang PS, et al. Among authors: wadley lm. J Exp Zool B Mol Dev Evol. 2005 Jan 15;304(1):50-63. doi: 10.1002/jez.b.21024. J Exp Zool B Mol Dev Evol. 2005. PMID: 15595717
Evaluating and learning from RNA pseudotorsional space: quantitative validation of a reduced representation for RNA structure.
Wadley LM, Keating KS, Duarte CM, Pyle AM. Wadley LM, et al. J Mol Biol. 2007 Sep 28;372(4):942-957. doi: 10.1016/j.jmb.2007.06.058. Epub 2007 Jun 27. J Mol Biol. 2007. PMID: 17707400 Free PMC article.
The identification of novel RNA structural motifs using COMPADRES: an automated approach to structural discovery.
Wadley LM, Pyle AM. Wadley LM, et al. Nucleic Acids Res. 2004 Dec 17;32(22):6650-9. doi: 10.1093/nar/gkh1002. Print 2004. Nucleic Acids Res. 2004. PMID: 15608296 Free PMC article.
RNA structure comparison, motif search and discovery using a reduced representation of RNA conformational space.
Duarte CM, Wadley LM, Pyle AM. Duarte CM, et al. Among authors: wadley lm. Nucleic Acids Res. 2003 Aug 15;31(16):4755-61. doi: 10.1093/nar/gkg682. Nucleic Acids Res. 2003. PMID: 12907716 Free PMC article.