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Controlling for gene expression changes in transcription factor protein networks.
Banks CA, Lee ZT, Boanca G, Lakshminarasimhan M, Groppe BD, Wen Z, Hattem GL, Seidel CW, Florens L, Washburn MP. Banks CA, et al. Mol Cell Proteomics. 2014 Jun;13(6):1510-22. doi: 10.1074/mcp.M113.033902. Epub 2014 Apr 10. Mol Cell Proteomics. 2014. PMID: 24722732 Free PMC article.
Improving proteomics mass accuracy by dynamic offline lock mass.
Zhang Y, Wen Z, Washburn MP, Florens L. Zhang Y, et al. Anal Chem. 2011 Dec 15;83(24):9344-51. doi: 10.1021/ac201867h. Epub 2011 Nov 16. Anal Chem. 2011. PMID: 22044264
Within every MS1 survey spectrum, DOLM dynamically selected the strongest n background ions for statistical treatments and m/z recalibration. We systematically optimized the mass profile abstraction method to find one single m/z value to represent an ion and the num …
Within every MS1 survey spectrum, DOLM dynamically selected the strongest n background ions for statistical treatments and m/z recali …
A label free quantitative proteomic analysis of the Saccharomyces cerevisiae nucleus.
Mosley AL, Florens L, Wen Z, Washburn MP. Mosley AL, et al. J Proteomics. 2009 Feb 15;72(1):110-20. doi: 10.1016/j.jprot.2008.10.008. Epub 2008 Nov 8. J Proteomics. 2009. PMID: 19038371 Free PMC article.
Dynamic and Combinatorial Landscape of Histone Modifications during the Intraerythrocytic Developmental Cycle of the Malaria Parasite.
Saraf A, Cervantes S, Bunnik EM, Ponts N, Sardiu ME, Chung DW, Prudhomme J, Varberg JM, Wen Z, Washburn MP, Florens L, Le Roch KG. Saraf A, et al. J Proteome Res. 2016 Aug 5;15(8):2787-801. doi: 10.1021/acs.jproteome.6b00366. Epub 2016 Jun 24. J Proteome Res. 2016. PMID: 27291344 Free PMC article.
GCSBA-Net:Gabor-based and Cascade Squeeze Bi-Attention Network for Gland Segmentation.
Wen Z, Feng R, Liu J, Li Y, Ying S. Wen Z, et al. IEEE J Biomed Health Inform. 2020 Aug 11;PP. doi: 10.1109/JBHI.2020.3015844. Online ahead of print. IEEE J Biomed Health Inform. 2020. PMID: 32780703
LncRNA TGFB2-AS1 regulates lung adenocarcinoma progression via act as a sponge for miR-340-5p to target EDNRB expression.
Ling Z, Wen Z, Tang Z, Chen J, Mo S, Wei X, Hu Z. Ling Z, et al. Among authors: wen z. Am J Transl Res. 2020 Jul 15;12(7):3813-3821. eCollection 2020. Am J Transl Res. 2020. PMID: 32774737 Free PMC article.
Regulation of TP73 transcription by Hippo-YAP signaling.
Wen Z, Wang Y, Qi S, Ma M, Li J, Yu FX. Wen Z, et al. Biochem Biophys Res Commun. 2020 Aug 6:S0006-291X(20)31533-3. doi: 10.1016/j.bbrc.2020.07.132. Online ahead of print. Biochem Biophys Res Commun. 2020. PMID: 32773110
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