Westbrook J - Search Results

1

Ligand Depot: a data warehouse for ligands bound to macromolecules.

Feng Z, Chen L, Maddula H, Akcan O, Oughtred R, Berman HM, Westbrook J. Feng Z, et al. Among authors: westbrook j. Bioinformatics. 2004 Sep 1;20(13):2153-5. doi: 10.1093/bioinformatics/bth214. Epub 2004 Apr 1. Bioinformatics. 2004. PMID: 15059838

2

The Protein Data Bank: unifying the archive.

Westbrook J, Feng Z, Jain S, Bhat TN, Thanki N, Ravichandran V, Gilliland GL, Bluhm W, Weissig H, Greer DS, Bourne PE, Berman HM. Westbrook J, et al. Nucleic Acids Res. 2002 Jan 1;30(1):245-8. doi: 10.1093/nar/30.1.245. Nucleic Acids Res. 2002. PMID: 11752306 Free PMC article.

3

The Nucleic Acid Database.

Berman HM, Westbrook J, Feng Z, Iype L, Schneider B, Zardecki C. Berman HM, et al. Among authors: westbrook j. Acta Crystallogr D Biol Crystallogr. 2002 Jun;58(Pt 6 No 1):889-98. doi: 10.1107/s0907444902003487. Epub 2002 May 29. Acta Crystallogr D Biol Crystallogr. 2002. PMID: 12037326

4

The Protein Data Bank.

Berman HM, Battistuz T, Bhat TN, Bluhm WF, Bourne PE, Burkhardt K, Feng Z, Gilliland GL, Iype L, Jain S, Fagan P, Marvin J, Padilla D, Ravichandran V, Schneider B, Thanki N, Weissig H, Westbrook JD, Zardecki C. Berman HM, et al. Among authors: westbrook jd. Acta Crystallogr D Biol Crystallogr. 2002 Jun;58(Pt 6 No 1):899-907. doi: 10.1107/s0907444902003451. Epub 2002 May 29. Acta Crystallogr D Biol Crystallogr. 2002. PMID: 12037327

5

An ontology driven architecture for derived representations of macromolecular structure.

Greer DS, Westbrook JD, Bourne PE. Greer DS, et al. Bioinformatics. 2002 Sep;18(9):1280-1. doi: 10.1093/bioinformatics/18.9.1280. Bioinformatics. 2002. PMID: 12217927

6

The Protein Data Bank and structural genomics.

Westbrook J, Feng Z, Chen L, Yang H, Berman HM. Westbrook J, et al. Nucleic Acids Res. 2003 Jan 1;31(1):489-91. doi: 10.1093/nar/gkg068. Nucleic Acids Res. 2003. PMID: 12520059 Free PMC article.

7

The PDB format, mmCIF, and other data formats.

Westbrook JD, Fitzgerald PM. Westbrook JD, et al. Methods Biochem Anal. 2003;44:161-79. Methods Biochem Anal. 2003. PMID: 12647386 No abstract available.

8

Tools for the automatic identification and classification of RNA base pairs.

Yang H, Jossinet F, Leontis N, Chen L, Westbrook J, Berman H, Westhof E. Yang H, et al. Among authors: westbrook j. Nucleic Acids Res. 2003 Jul 1;31(13):3450-60. doi: 10.1093/nar/gkg529. Nucleic Acids Res. 2003. PMID: 12824344 Free PMC article.

9

The need for dictionaries, ontologies, and controlled vocabularies.

Berman HM, Westbrook J. Berman HM, et al. Among authors: westbrook j. OMICS. 2003 Spring;7(1):9-10. doi: 10.1089/153623103322006481. OMICS. 2003. PMID: 12831545 No abstract available.

10

The distribution and query systems of the RCSB Protein Data Bank.

Bourne PE, Addess KJ, Bluhm WF, Chen L, Deshpande N, Feng Z, Fleri W, Green R, Merino-Ott JC, Townsend-Merino W, Weissig H, Westbrook J, Berman HM. Bourne PE, et al. Among authors: westbrook j. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D223-5. doi: 10.1093/nar/gkh096. Nucleic Acids Res. 2004. PMID: 14681399 Free PMC article.

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