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Epistasis between beneficial mutations and the phenotype-to-fitness Map for a ssDNA virus.
Rokyta DR, Joyce P, Caudle SB, Miller C, Beisel CJ, Wichman HA. Rokyta DR, et al. PLoS Genet. 2011 Jun;7(6):e1002075. doi: 10.1371/journal.pgen.1002075. Epub 2011 Jun 2. PLoS Genet. 2011. PMID: 21655079 Free PMC article.
Genic incompatibilities in two hybrid bacteriophages.
Rokyta DR, Wichman HA. Rokyta DR, et al. Mol Biol Evol. 2009 Dec;26(12):2831-9. doi: 10.1093/molbev/msp199. Epub 2009 Sep 2. Mol Biol Evol. 2009. PMID: 19726536 Free PMC article.
The genetics of adaptation for eight microvirid bacteriophages.
Rokyta DR, Abdo Z, Wichman HA. Rokyta DR, et al. J Mol Evol. 2009 Sep;69(3):229-39. doi: 10.1007/s00239-009-9267-9. Epub 2009 Aug 20. J Mol Evol. 2009. PMID: 19693424 Free PMC article.
Beneficial fitness effects are not exponential for two viruses.
Rokyta DR, Beisel CJ, Joyce P, Ferris MT, Burch CL, Wichman HA. Rokyta DR, et al. J Mol Evol. 2008 Oct;67(4):368-76. doi: 10.1007/s00239-008-9153-x. Epub 2008 Sep 9. J Mol Evol. 2008. PMID: 18779988 Free PMC article.
Loss of LINE-1 activity in the megabats.
Cantrell MA, Scott L, Brown CJ, Martinez AR, Wichman HA. Cantrell MA, et al. Genetics. 2008 Jan;178(1):393-404. doi: 10.1534/genetics.107.080275. Genetics. 2008. PMID: 18202382 Free PMC article.
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