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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2002 1
2004 1
2005 1
2007 3
2008 3
2009 2
2010 6
2011 2
2012 5
2013 4
2014 3
2015 3
2016 3
2017 6
2018 2
2019 2
2020 4
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49 results
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Page 1
Recent advances in RNA folding.
Fallmann J, Will S, Engelhardt J, Grüning B, Backofen R, Stadler PF. Fallmann J, et al. J Biotechnol. 2017 Nov 10;261:97-104. doi: 10.1016/j.jbiotec.2017.07.007. Epub 2017 Jul 8. J Biotechnol. 2017. PMID: 28690134 Free article. Review.
Design of Artificial Riboswitches as Biosensors.
Findeiß S, Etzel M, Will S, Mörl M, Stadler PF. Findeiß S, et al. Sensors (Basel). 2017 Aug 30;17(9):1990. doi: 10.3390/s17091990. Sensors (Basel). 2017. PMID: 28867802 Free PMC article. Review.
Identification of functional elements and regulatory circuits by Drosophila modENCODE.
modENCODE Consortium, Roy S, Ernst J, Kharchenko PV, Kheradpour P, Negre N, Eaton ML, Landolin JM, Bristow CA, Ma L, Lin MF, Washietl S, Arshinoff BI, Ay F, Meyer PE, Robine N, Washington NL, Di Stefano L, Berezikov E, Brown CD, Candeias R, Carlson JW, Carr A, Jungreis I, Marbach D, Sealfon R, Tolstorukov MY, Will S, Alekseyenko AA, Artieri C, Booth BW, Brooks AN, Dai Q, Davis CA, Duff MO, Feng X, Gorchakov AA, Gu T, Henikoff JG, Kapranov P, Li R, MacAlpine HK, Malone J, Minoda A, Nordman J, Okamura K, Perry M, Powell SK, Riddle NC, Sakai A, Samsonova A, Sandler JE, Schwartz YB, Sher N, Spokony R, Sturgill D, van Baren M, Wan KH, Yang L, Yu C, Feingold E, Good P, Guyer M, Lowdon R, Ahmad K, Andrews J, Berger B, Brenner SE, Brent MR, Cherbas L, Elgin SC, Gingeras TR, Grossman R, Hoskins RA, Kaufman TC, Kent W, Kuroda MI, Orr-Weaver T, Perrimon N, Pirrotta V, Posakony JW, Ren B, Russell S, Cherbas P, Graveley BR, Lewis S, Micklem G, Oliver B, Park PJ, Celniker SE, Henikoff S, Karpen GH, Lai EC, MacAlpine DM, Stein LD, White KP, Kellis M. modENCODE Consortium, et al. Science. 2010 Dec 24;330(6012):1787-97. doi: 10.1126/science.1198374. Epub 2010 Dec 22. Science. 2010. PMID: 21177974 Free PMC article.
Tractable RNA-ligand interaction kinetics.
Kühnl F, Stadler PF, Will S. Kühnl F, et al. BMC Bioinformatics. 2017 Oct 16;18(Suppl 12):424. doi: 10.1186/s12859-017-1823-5. BMC Bioinformatics. 2017. PMID: 29072147 Free PMC article.
Freiburg RNA tools: a central online resource for RNA-focused research and teaching.
Raden M, Ali SM, Alkhnbashi OS, Busch A, Costa F, Davis JA, Eggenhofer F, Gelhausen R, Georg J, Heyne S, Hiller M, Kundu K, Kleinkauf R, Lott SC, Mohamed MM, Mattheis A, Miladi M, Richter AS, Will S, Wolff J, Wright PR, Backofen R. Raden M, et al. Nucleic Acids Res. 2018 Jul 2;46(W1):W25-W29. doi: 10.1093/nar/gky329. Nucleic Acids Res. 2018. PMID: 29788132 Free PMC article.
Computational analysis of noncoding RNAs.
Washietl S, Will S, Hendrix DA, Goff LA, Rinn JL, Berger B, Kellis M. Washietl S, et al. Wiley Interdiscip Rev RNA. 2012 Nov-Dec;3(6):759-78. doi: 10.1002/wrna.1134. Epub 2012 Sep 18. Wiley Interdiscip Rev RNA. 2012. PMID: 22991327 Free PMC article. Review.
Knotty: efficient and accurate prediction of complex RNA pseudoknot structures.
Jabbari H, Wark I, Montemagno C, Will S. Jabbari H, et al. Bioinformatics. 2018 Nov 15;34(22):3849-3856. doi: 10.1093/bioinformatics/bty420. Bioinformatics. 2018. PMID: 29868872
Sparse RNA folding revisited: space-efficient minimum free energy structure prediction.
Will S, Jabbari H. Will S, et al. Algorithms Mol Biol. 2016 Apr 23;11:7. doi: 10.1186/s13015-016-0071-y. eCollection 2016. Algorithms Mol Biol. 2016. PMID: 27110275 Free PMC article. Review.
Fixed-parameter tractable sampling for RNA design with multiple target structures.
Hammer S, Wang W, Will S, Ponty Y. Hammer S, et al. BMC Bioinformatics. 2019 Apr 25;20(1):209. doi: 10.1186/s12859-019-2784-7. BMC Bioinformatics. 2019. PMID: 31023239 Free PMC article.
IntaRNAhelix-composing RNA-RNA interactions from stable inter-molecular helices boosts bacterial sRNA target prediction.
Gelhausen R, Will S, Hofacker IL, Backofen R, Raden M. Gelhausen R, et al. J Bioinform Comput Biol. 2019 Oct;17(5):1940009. doi: 10.1142/S0219720019400092. J Bioinform Comput Biol. 2019. PMID: 31856671
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