Wingender E - Search Results

1

Integration of gene expression data with prior knowledge for network analysis and validation.

Ante M, Wingender E, Fuchs M. Ante M, et al. Among authors: wingender e. BMC Res Notes. 2011 Nov 28;4:520. doi: 10.1186/1756-0500-4-520. BMC Res Notes. 2011. PMID: 22123172 Free PMC article.

2

Quantum coupled mutation finder: predicting functionally or structurally important sites in proteins using quantum Jensen-Shannon divergence and CUDA programming.

Gültas M, Düzgün G, Herzog S, Jäger SJ, Meckbach C, Wingender E, Waack S. Gültas M, et al. Among authors: wingender e. BMC Bioinformatics. 2014 Apr 3;15:96. doi: 10.1186/1471-2105-15-96. BMC Bioinformatics. 2014. PMID: 24694117 Free PMC article.

3

EndoNet: an information resource about the intercellular signaling network.

Dönitz J, Wingender E. Dönitz J, et al. Among authors: wingender e. BMC Syst Biol. 2014 Apr 24;8:49. doi: 10.1186/1752-0509-8-49. BMC Syst Biol. 2014. PMID: 24758335 Free PMC article.

4

PC-TraFF: identification of potentially collaborating transcription factors using pointwise mutual information.

Meckbach C, Tacke R, Hua X, Waack S, Wingender E, Gültas M. Meckbach C, et al. Among authors: wingender e. BMC Bioinformatics. 2015 Dec 1;16:400. doi: 10.1186/s12859-015-0827-2. BMC Bioinformatics. 2015. PMID: 26627005 Free PMC article.

5

Multiobjective triclustering of time-series transcriptome data reveals key genes of biological processes.

Bhar A, Haubrock M, Mukhopadhyay A, Wingender E. Bhar A, et al. Among authors: wingender e. BMC Bioinformatics. 2015 Jun 26;16:200. doi: 10.1186/s12859-015-0635-8. BMC Bioinformatics. 2015. PMID: 26108437 Free PMC article.

6

Comparative analysis of topological patterns in different mammalian networks.

Goemann B, Potapov AP, Ante M, Wingender E. Goemann B, et al. Among authors: wingender e. Genome Inform. 2009 Oct;23(1):32-45. Genome Inform. 2009. PMID: 20180260

7

An approach to evaluate the topological significance of motifs and other patterns in regulatory networks.

Goemann B, Wingender E, Potapov AP. Goemann B, et al. Among authors: wingender e. BMC Syst Biol. 2009 May 19;3:53. doi: 10.1186/1752-0509-3-53. BMC Syst Biol. 2009. PMID: 19454001 Free PMC article.

8

The pairwise disconnectivity index as a new metric for the topological analysis of regulatory networks.

Potapov AP, Goemann B, Wingender E. Potapov AP, et al. Among authors: wingender e. BMC Bioinformatics. 2008 May 2;9:227. doi: 10.1186/1471-2105-9-227. BMC Bioinformatics. 2008. PMID: 18454847 Free PMC article.

9

DEEP--a tool for differential expression effector prediction.

Degenhardt J, Haubrock M, Dönitz J, Wingender E, Crass T. Degenhardt J, et al. Among authors: wingender e. Nucleic Acids Res. 2007 Jul;35(Web Server issue):W619-24. doi: 10.1093/nar/gkm469. Epub 2007 Jun 21. Nucleic Acids Res. 2007. PMID: 17584786 Free PMC article.

10

Topology of mammalian transcription networks.

Potapov AP, Voss N, Sasse N, Wingender E. Potapov AP, et al. Among authors: wingender e. Genome Inform. 2005;16(2):270-8. Genome Inform. 2005. PMID: 16901109

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