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Phaser crystallographic software.
McCoy AJ, Grosse-Kunstleve RW, Adams PD, Winn MD, Storoni LC, Read RJ. McCoy AJ, et al. J Appl Crystallogr. 2007 Aug 1;40(Pt 4):658-674. doi: 10.1107/S0021889807021206. Epub 2007 Jul 13. J Appl Crystallogr. 2007. PMID: 19461840 Free PMC article.
SPINE workshop on automated X-ray analysis: a progress report.
Bahar M, Ballard C, Cohen SX, Cowtan KD, Dodson EJ, Emsley P, Esnouf RM, Keegan R, Lamzin V, Langer G, Levdikov V, Long F, Meier C, Muller A, Murshudov GN, Perrakis A, Siebold C, Stein N, Turkenburg MG, Vagin AA, Winn M, Winter G, Wilson KS. Bahar M, et al. Acta Crystallogr D Biol Crystallogr. 2006 Oct;62(Pt 10):1170-83. doi: 10.1107/S0907444906032197. Epub 2006 Sep 19. Acta Crystallogr D Biol Crystallogr. 2006. PMID: 17001094 Review.
REFMAC5 for the refinement of macromolecular crystal structures.
Murshudov GN, Skubák P, Lebedev AA, Pannu NS, Steiner RA, Nicholls RA, Winn MD, Long F, Vagin AA. Murshudov GN, et al. Acta Crystallogr D Biol Crystallogr. 2011 Apr;67(Pt 4):355-67. doi: 10.1107/S0907444911001314. Epub 2011 Mar 18. Acta Crystallogr D Biol Crystallogr. 2011. PMID: 21460454 Free PMC article.
MrBUMP: an automated pipeline for molecular replacement.
Keegan RM, Winn MD. Keegan RM, et al. Acta Crystallogr D Biol Crystallogr. 2008 Jan;64(Pt 1):119-24. doi: 10.1107/S0907444907037195. Epub 2007 Dec 5. Acta Crystallogr D Biol Crystallogr. 2008. PMID: 18094475 Free PMC article.
Collaborative computational project for electron cryo-microscopy.
Wood C, Burnley T, Patwardhan A, Scheres S, Topf M, Roseman A, Winn M. Wood C, et al. Acta Crystallogr D Biol Crystallogr. 2015 Jan 1;71(Pt 1):123-6. doi: 10.1107/S1399004714018070. Epub 2015 Jan 1. Acta Crystallogr D Biol Crystallogr. 2015. PMID: 25615866 Free PMC article.
Data management challenges in three-dimensional EM.
Patwardhan A, Carazo JM, Carragher B, Henderson R, Heymann JB, Hill E, Jensen GJ, Lagerstedt I, Lawson CL, Ludtke SJ, Mastronarde D, Moore WJ, Roseman A, Rosenthal P, Sorzano CO, Sanz-García E, Scheres SH, Subramaniam S, Westbrook J, Winn M, Swedlow JR, Kleywegt GJ. Patwardhan A, et al. Nat Struct Mol Biol. 2012 Dec;19(12):1203-7. doi: 10.1038/nsmb.2426. Nat Struct Mol Biol. 2012. PMID: 23211764 Free PMC article.
Molecular replacement using ab initio polyalanine models generated with ROSETTA.
Rigden DJ, Keegan RM, Winn MD. Rigden DJ, et al. Acta Crystallogr D Biol Crystallogr. 2008 Dec;64(Pt 12):1288-91. doi: 10.1107/S0907444908033192. Epub 2008 Nov 18. Acta Crystallogr D Biol Crystallogr. 2008. PMID: 19018106
CCP4i2: the new graphical user interface to the CCP4 program suite.
Potterton L, Agirre J, Ballard C, Cowtan K, Dodson E, Evans PR, Jenkins HT, Keegan R, Krissinel E, Stevenson K, Lebedev A, McNicholas SJ, Nicholls RA, Noble M, Pannu NS, Roth C, Sheldrick G, Skubak P, Turkenburg J, Uski V, von Delft F, Waterman D, Wilson K, Winn M, Wojdyr M. Potterton L, et al. Acta Crystallogr D Struct Biol. 2018 Feb 1;74(Pt 2):68-84. doi: 10.1107/S2059798317016035. Epub 2018 Feb 1. Acta Crystallogr D Struct Biol. 2018. PMID: 29533233 Free PMC article.
Distributed computing for macromolecular crystallography.
Krissinel E, Uski V, Lebedev A, Winn M, Ballard C. Krissinel E, et al. Acta Crystallogr D Struct Biol. 2018 Feb 1;74(Pt 2):143-151. doi: 10.1107/S2059798317014565. Epub 2018 Feb 1. Acta Crystallogr D Struct Biol. 2018. PMID: 29533240 Free PMC article.
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