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Protein--protein interaction maps: a lead towards cellular functions.
Legrain P, Wojcik J, Gauthier JM. Legrain P, et al. Among authors: wojcik j. Trends Genet. 2001 Jun;17(6):346-52. doi: 10.1016/s0168-9525(01)02323-x. Trends Genet. 2001. PMID: 11377797 Review.
PIMWalker: visualising protein interaction networks using the HUPO PSI molecular interaction format.
Meil A, Durand P, Wojcik J. Meil A, et al. Among authors: wojcik j. Appl Bioinformatics. 2005;4(2):137-9. doi: 10.2165/00822942-200504020-00007. Appl Bioinformatics. 2005. PMID: 16128615
Protein interaction mapping: a Drosophila case study.
Formstecher E, Aresta S, Collura V, Hamburger A, Meil A, Trehin A, Reverdy C, Betin V, Maire S, Brun C, Jacq B, Arpin M, Bellaiche Y, Bellusci S, Benaroch P, Bornens M, Chanet R, Chavrier P, Delattre O, Doye V, Fehon R, Faye G, Galli T, Girault JA, Goud B, de Gunzburg J, Johannes L, Junier MP, Mirouse V, Mukherjee A, Papadopoulo D, Perez F, Plessis A, Rossé C, Saule S, Stoppa-Lyonnet D, Vincent A, White M, Legrain P, Wojcik J, Camonis J, Daviet L. Formstecher E, et al. Among authors: wojcik j. Genome Res. 2005 Mar;15(3):376-84. doi: 10.1101/gr.2659105. Epub 2005 Feb 14. Genome Res. 2005. PMID: 15710747 Free PMC article.
Functional proteomics mapping of a human signaling pathway.
Colland F, Jacq X, Trouplin V, Mougin C, Groizeleau C, Hamburger A, Meil A, Wojcik J, Legrain P, Gauthier JM. Colland F, et al. Among authors: wojcik j. Genome Res. 2004 Jul;14(7):1324-32. doi: 10.1101/gr.2334104. Genome Res. 2004. PMID: 15231748 Free PMC article.
Prediction, assessment and validation of protein interaction maps in bacteria.
Wojcik J, Boneca IG, Legrain P. Wojcik J, et al. J Mol Biol. 2002 Nov 1;323(4):763-70. doi: 10.1016/s0022-2836(02)01009-4. J Mol Biol. 2002. PMID: 12419263
Functional classification of proteins for the prediction of cellular function from a protein-protein interaction network.
Brun C, Chevenet F, Martin D, Wojcik J, Guénoche A, Jacq B. Brun C, et al. Among authors: wojcik j. Genome Biol. 2003;5(1):R6. doi: 10.1186/gb-2003-5-1-r6. Epub 2003 Dec 15. Genome Biol. 2003. PMID: 14709178 Free PMC article.
Protein-protein interaction map inference using interacting domain profile pairs.
Wojcik J, Schächter V. Wojcik J, et al. Bioinformatics. 2001;17 Suppl 1:S296-305. doi: 10.1093/bioinformatics/17.suppl_1.s296. Bioinformatics. 2001. PMID: 11473021
Proteomic databases and software on the web.
Wojcik J, Schächter V. Wojcik J, et al. Brief Bioinform. 2000 Sep;1(3):250-9. doi: 10.1093/bib/1.3.250. Brief Bioinform. 2000. PMID: 11465036
The protein-protein interaction map of Helicobacter pylori.
Rain JC, Selig L, De Reuse H, Battaglia V, Reverdy C, Simon S, Lenzen G, Petel F, Wojcik J, Schächter V, Chemama Y, Labigne A, Legrain P. Rain JC, et al. Among authors: wojcik j. Nature. 2001 Jan 11;409(6817):211-5. doi: 10.1038/35051615. Nature. 2001. PMID: 11196647
GenoLink: a graph-based querying and browsing system for investigating the function of genes and proteins.
Durand P, Labarre L, Meil A, Divo JL, Vandenbrouck Y, Viari A, Wojcik J. Durand P, et al. Among authors: wojcik j. BMC Bioinformatics. 2006 Jan 17;7:21. doi: 10.1186/1471-2105-7-21. BMC Bioinformatics. 2006. PMID: 16417636 Free PMC article.
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