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A horizontal alignment tool for numerical trend discovery in sequence data: application to protein hydropathy.
Hadzipasic O, Wrabl JO, Hilser VJ. Hadzipasic O, et al. Among authors: wrabl jo. PLoS Comput Biol. 2013;9(10):e1003247. doi: 10.1371/journal.pcbi.1003247. Epub 2013 Oct 10. PLoS Comput Biol. 2013. PMID: 24130469 Free PMC article.
CASP5 assessment of fold recognition target predictions.
Kinch LN, Wrabl JO, Krishna SS, Majumdar I, Sadreyev RI, Qi Y, Pei J, Cheng H, Grishin NV. Kinch LN, et al. Among authors: wrabl jo. Proteins. 2003;53 Suppl 6:395-409. doi: 10.1002/prot.10557. Proteins. 2003. PMID: 14579328
Energetic profiling of protein folds.
Vertrees J, Wrabl JO, Hilser VJ. Vertrees J, et al. Among authors: wrabl jo. Methods Enzymol. 2009;455:299-327. doi: 10.1016/S0076-6879(08)04211-0. Methods Enzymol. 2009. PMID: 19289211 Free PMC article.
The torsin-family AAA+ protein OOC-5 contains a critical disulfide adjacent to Sensor-II that couples redox state to nucleotide binding.
Zhu L, Wrabl JO, Hayashi AP, Rose LS, Thomas PJ. Zhu L, et al. Among authors: wrabl jo. Mol Biol Cell. 2008 Aug;19(8):3599-612. doi: 10.1091/mbc.e08-01-0015. Epub 2008 Jun 11. Mol Biol Cell. 2008. PMID: 18550799 Free PMC article.
Investigating homology between proteins using energetic profiles.
Wrabl JO, Hilser VJ. Wrabl JO, et al. PLoS Comput Biol. 2010 Mar 26;6(3):e1000722. doi: 10.1371/journal.pcbi.1000722. PLoS Comput Biol. 2010. PMID: 20361049 Free PMC article.
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