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Shotgun proteomics: tools for the analysis of complex biological systems.
Wu CC, MacCoss MJ. Wu CC, et al. Curr Opin Mol Ther. 2002 Jun;4(3):242-50. Curr Opin Mol Ther. 2002. PMID: 12139310 Review.
Proteomic analysis of the stacked Golgi complex.
Lowenthal MS, Howell KE, Wu CC. Lowenthal MS, et al. Among authors: wu cc. Methods Mol Biol. 2008;432:37-49. doi: 10.1007/978-1-59745-028-7_3. Methods Mol Biol. 2008. PMID: 18370009
MudPIT analysis: application to human heart tissue.
Kline KG, Wu CC. Kline KG, et al. Among authors: wu cc. Methods Mol Biol. 2009;528:281-93. doi: 10.1007/978-1-60327-310-7_20. Methods Mol Biol. 2009. PMID: 19153700 Free PMC article.
Shotgun analysis of integral membrane proteins facilitated by elevated temperature.
Speers AE, Blackler AR, Wu CC. Speers AE, et al. Among authors: wu cc. Anal Chem. 2007 Jun 15;79(12):4613-20. doi: 10.1021/ac0700225. Epub 2007 May 15. Anal Chem. 2007. PMID: 17500534
Improved precision of proteomic measurements in immunoprecipitation based purifications using relative quantitation.
Rogstad SM, Sorkina T, Sorkin A, Wu CC. Rogstad SM, et al. Among authors: wu cc. Anal Chem. 2013 May 7;85(9):4301-6. doi: 10.1021/ac4002222. Epub 2013 Apr 16. Anal Chem. 2013. PMID: 23517085 Free PMC article.
Maximizing peptide identification events in proteomic workflows using data-dependent acquisition (DDA).
Bateman NW, Goulding SP, Shulman NJ, Gadok AK, Szumlinski KK, MacCoss MJ, Wu CC. Bateman NW, et al. Among authors: wu cc. Mol Cell Proteomics. 2014 Jan;13(1):329-38. doi: 10.1074/mcp.M112.026500. Epub 2013 Jul 2. Mol Cell Proteomics. 2014. PMID: 23820513 Free PMC article.
Quantitative strategies to fuel the merger of discovery and hypothesis-driven shotgun proteomics.
Kline KG, Finney GL, Wu CC. Kline KG, et al. Among authors: wu cc. Brief Funct Genomic Proteomic. 2009 Mar;8(2):114-25. doi: 10.1093/bfgp/elp008. Brief Funct Genomic Proteomic. 2009. PMID: 19398505 Free PMC article. Review.
Organellar proteomics reveals Golgi arginine dimethylation.
Wu CC, MacCoss MJ, Mardones G, Finnigan C, Mogelsvang S, Yates JR 3rd, Howell KE. Wu CC, et al. Mol Biol Cell. 2004 Jun;15(6):2907-19. doi: 10.1091/mbc.e04-02-0101. Epub 2004 Mar 26. Mol Biol Cell. 2004. PMID: 15047867 Free PMC article.
Proteomic characterization of integral membrane proteins using thermostatted liquid chromatography coupled with tandem mass spectrometry.
Moore SM, Wu CC. Moore SM, et al. Among authors: wu cc. Methods Mol Biol. 2012;914:155-64. doi: 10.1007/978-1-62703-023-6_9. Methods Mol Biol. 2012. PMID: 22976027
Mass spectrometry accelerates membrane protein analysis.
Savas JN, Stein BD, Wu CC, Yates JR 3rd. Savas JN, et al. Among authors: wu cc. Trends Biochem Sci. 2011 Jul;36(7):388-96. doi: 10.1016/j.tibs.2011.04.005. Epub 2011 May 26. Trends Biochem Sci. 2011. PMID: 21616670 Free PMC article. Review.
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