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Updates in Rhea: SPARQLing biochemical reaction data.
Lombardot T, Morgat A, Axelsen KB, Aimo L, Hyka-Nouspikel N, Niknejad A, Ignatchenko A, Xenarios I, Coudert E, Redaschi N, Bridge A. Lombardot T, et al. Nucleic Acids Res. 2019 Jan 8;47(D1):D596-D600. doi: 10.1093/nar/gky876. Nucleic Acids Res. 2019. PMID: 30272209 Free PMC article.
Extensive remodeling of DC function by rapid maturation-induced transcriptional silencing.
Seguín-Estévez Q, Dunand-Sauthier I, Lemeille S, Iseli C, Ibberson M, Ioannidis V, Schmid CD, Rousseau P, Barras E, Geinoz A, Xenarios I, Acha-Orbea H, Reith W. Seguín-Estévez Q, et al. Nucleic Acids Res. 2014 Sep;42(15):9641-55. doi: 10.1093/nar/gku674. Epub 2014 Aug 7. Nucleic Acids Res. 2014. PMID: 25104025 Free PMC article.
Rhea--a manually curated resource of biochemical reactions.
Alcántara R, Axelsen KB, Morgat A, Belda E, Coudert E, Bridge A, Cao H, de Matos P, Ennis M, Turner S, Owen G, Bougueleret L, Xenarios I, Steinbeck C. Alcántara R, et al. Nucleic Acids Res. 2012 Jan;40(Database issue):D754-60. doi: 10.1093/nar/gkr1126. Epub 2011 Dec 1. Nucleic Acids Res. 2012. PMID: 22135291 Free PMC article.
The ins and outs of eukaryotic viruses: Knowledge base and ontology of a viral infection.
Hulo C, Masson P, de Castro E, Auchincloss AH, Foulger R, Poux S, Lomax J, Bougueleret L, Xenarios I, Le Mercier P. Hulo C, et al. PLoS One. 2017 Feb 16;12(2):e0171746. doi: 10.1371/journal.pone.0171746. eCollection 2017. PLoS One. 2017. PMID: 28207819 Free PMC article.
Updates in Rhea - an expert curated resource of biochemical reactions.
Morgat A, Lombardot T, Axelsen KB, Aimo L, Niknejad A, Hyka-Nouspikel N, Coudert E, Pozzato M, Pagni M, Moretti S, Rosanoff S, Onwubiko J, Bougueleret L, Xenarios I, Redaschi N, Bridge A. Morgat A, et al. Nucleic Acids Res. 2017 Apr 20;45(7):4279. doi: 10.1093/nar/gkw1299. Nucleic Acids Res. 2017. PMID: 27980062 Free PMC article. No abstract available.
An integrated ontology resource to explore and study host-virus relationships.
Masson P, Hulo C, de Castro E, Foulger R, Poux S, Bridge A, Lomax J, Bougueleret L, Xenarios I, Le Mercier P. Masson P, et al. PLoS One. 2014 Sep 18;9(9):e108075. doi: 10.1371/journal.pone.0108075. eCollection 2014. PLoS One. 2014. PMID: 25233094 Free PMC article.
Animal Toxins: How is Complexity Represented in Databases?
Jungo F, Estreicher A, Bairoch A, Bougueleret L, Xenarios I. Jungo F, et al. Toxins (Basel). 2010 Feb;2(2):262-82. doi: 10.3390/toxins2020262. Epub 2010 Feb 21. Toxins (Basel). 2010. PMID: 22069583 Free PMC article.
ViralZone: a knowledge resource to understand virus diversity.
Hulo C, de Castro E, Masson P, Bougueleret L, Bairoch A, Xenarios I, Le Mercier P. Hulo C, et al. Nucleic Acids Res. 2011 Jan;39(Database issue):D576-82. doi: 10.1093/nar/gkq901. Epub 2010 Oct 14. Nucleic Acids Res. 2011. PMID: 20947564 Free PMC article.
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