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Complex multi-enhancer contacts captured by genome architecture mapping.
Beagrie RA, Scialdone A, Schueler M, Kraemer DC, Chotalia M, Xie SQ, Barbieri M, de Santiago I, Lavitas LM, Branco MR, Fraser J, Dostie J, Game L, Dillon N, Edwards PA, Nicodemi M, Pombo A. Beagrie RA, et al. Among authors: xie sq. Nature. 2017 Mar 23;543(7646):519-524. doi: 10.1038/nature21411. Epub 2017 Mar 8. Nature. 2017. PMID: 28273065 Free PMC article.
Poised transcription factories prime silent uPA gene prior to activation.
Ferrai C, Xie SQ, Luraghi P, Munari D, Ramirez F, Branco MR, Pombo A, Crippa MP. Ferrai C, et al. Among authors: xie sq. PLoS Biol. 2010 Jan;8(1):e1000270. doi: 10.1371/journal.pbio.1000270. Epub 2010 Jan 5. PLoS Biol. 2010. PMID: 20052287 Free PMC article.
Proteomic analysis of mitotic RNA polymerase II reveals novel interactors and association with proteins dysfunctional in disease.
Möller A, Xie SQ, Hosp F, Lang B, Phatnani HP, James S, Ramirez F, Collin GB, Naggert JK, Babu MM, Greenleaf AL, Selbach M, Pombo A. Möller A, et al. Among authors: xie sq. Mol Cell Proteomics. 2012 Jun;11(6):M111.011767. doi: 10.1074/mcp.M111.011767. Epub 2011 Dec 22. Mol Cell Proteomics. 2012. PMID: 22199231 Free PMC article.
Hierarchical folding and reorganization of chromosomes are linked to transcriptional changes in cellular differentiation.
Fraser J, Ferrai C, Chiariello AM, Schueler M, Rito T, Laudanno G, Barbieri M, Moore BL, Kraemer DC, Aitken S, Xie SQ, Morris KJ, Itoh M, Kawaji H, Jaeger I, Hayashizaki Y, Carninci P, Forrest AR; FANTOM Consortium; Semple CA, Dostie J, Pombo A, Nicodemi M. Fraser J, et al. Among authors: xie sq. Mol Syst Biol. 2015 Dec 23;11(12):852. doi: 10.15252/msb.20156492. Mol Syst Biol. 2015. PMID: 26700852 Free PMC article.
172 results