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11,227 results
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Hydrogen bonds and salt bridges across protein-protein interfaces.
Xu D, Tsai CJ, Nussinov R. Xu D, et al. Protein Eng. 1997 Sep;10(9):999-1012. doi: 10.1093/protein/10.9.999. Protein Eng. 1997. PMID: 9464564
Protein folding via binding and vice versa.
Tsai CJ, Xu D, Nussinov R. Tsai CJ, et al. Among authors: xu d. Fold Des. 1998;3(4):R71-80. doi: 10.1016/S1359-0278(98)00032-7. Fold Des. 1998. PMID: 9710571 Review.
Electrostatics, allostery, and activity of the yeast chorismate mutase.
Lin SL, Xu D, Li A, Nussinov R. Lin SL, et al. Among authors: xu d. Proteins. 1998 Jun 1;31(4):445-52. doi: 10.1002/(sici)1097-0134(19980601)31:4<445::aid-prot10>3.0.co;2-f. Proteins. 1998. PMID: 9626703
Mechanism and evolution of protein dimerization.
Xu D, Tsai CJ, Nussinov R. Xu D, et al. Protein Sci. 1998 Mar;7(3):533-44. doi: 10.1002/pro.5560070301. Protein Sci. 1998. PMID: 9541384 Free PMC article.
Favorable domain size in proteins.
Xu D, Nussinov R. Xu D, et al. Fold Des. 1998;3(1):11-7. doi: 10.1016/S1359-0278(98)00004-2. Fold Des. 1998. PMID: 9502316
Structural motifs at protein-protein interfaces: protein cores versus two-state and three-state model complexes.
Tsai CJ, Xu D, Nussinov R. Tsai CJ, et al. Among authors: xu d. Protein Sci. 1997 Sep;6(9):1793-805. doi: 10.1002/pro.5560060901. Protein Sci. 1997. PMID: 9300480 Free PMC article. Review.
Protein binding versus protein folding: the role of hydrophilic bridges in protein associations.
Xu D, Lin SL, Nussinov R. Xu D, et al. J Mol Biol. 1997 Jan 10;265(1):68-84. doi: 10.1006/jmbi.1996.0712. J Mol Biol. 1997. PMID: 8995525 Review.
Investigation of the enzymatic mechanism of the yeast chorismate mutase by docking a transition state analog.
Lin SL, Xu D, Li A, Rosen M, Wolfson HJ, Nussinov R. Lin SL, et al. Among authors: xu d. J Mol Biol. 1997 Sep 5;271(5):838-45. doi: 10.1006/jmbi.1997.1168. J Mol Biol. 1997. PMID: 9299331
Protein threading by PROSPECT: a prediction experiment in CASP3.
Xu Y, Xu D, Crawford OH, Einstein, Larimer F, Uberbacher E, Unseren MA, Zhang G. Xu Y, et al. Among authors: xu d. Protein Eng. 1999 Nov;12(11):899-907. doi: 10.1093/protein/12.11.899. Protein Eng. 1999. PMID: 10585495
Computational tools for protein modeling.
Xu D, Xu Y, Uberbacher EC. Xu D, et al. Among authors: xu y. Curr Protein Pept Sci. 2000 Jul;1(1):1-21. doi: 10.2174/1389203003381469. Curr Protein Pept Sci. 2000. PMID: 12369918 Review.
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