Xu H - Search Results

1

Genome-wide mapping of RELA(p65) binding identifies E2F1 as a transcriptional activator recruited by NF-kappaB upon TLR4 activation.

Lim CA, Yao F, Wong JJ, George J, Xu H, Chiu KP, Sung WK, Lipovich L, Vega VB, Chen J, Shahab A, Zhao XD, Hibberd M, Wei CL, Lim B, Ng HH, Ruan Y, Chin KC. Lim CA, et al. Among authors: xu h. Mol Cell. 2007 Aug 17;27(4):622-35. doi: 10.1016/j.molcel.2007.06.038. Mol Cell. 2007. PMID: 17707233 Free article.

2

Integration of external signaling pathways with the core transcriptional network in embryonic stem cells.

Chen X, Xu H, Yuan P, Fang F, Huss M, Vega VB, Wong E, Orlov YL, Zhang W, Jiang J, Loh YH, Yeo HC, Yeo ZX, Narang V, Govindarajan KR, Leong B, Shahab A, Ruan Y, Bourque G, Sung WK, Clarke ND, Wei CL, Ng HH. Chen X, et al. Among authors: xu h. Cell. 2008 Jun 13;133(6):1106-17. doi: 10.1016/j.cell.2008.04.043. Cell. 2008. PMID: 18555785 Free article.

3

An HMM approach to genome-wide identification of differential histone modification sites from ChIP-seq data.

Xu H, Wei CL, Lin F, Sung WK. Xu H, et al. Bioinformatics. 2008 Oct 15;24(20):2344-9. doi: 10.1093/bioinformatics/btn402. Epub 2008 Jul 29. Bioinformatics. 2008. PMID: 18667444

4

An oestrogen-receptor-alpha-bound human chromatin interactome.

Fullwood MJ, Liu MH, Pan YF, Liu J, Xu H, Mohamed YB, Orlov YL, Velkov S, Ho A, Mei PH, Chew EG, Huang PY, Welboren WJ, Han Y, Ooi HS, Ariyaratne PN, Vega VB, Luo Y, Tan PY, Choy PY, Wansa KD, Zhao B, Lim KS, Leow SC, Yow JS, Joseph R, Li H, Desai KV, Thomsen JS, Lee YK, Karuturi RK, Herve T, Bourque G, Stunnenberg HG, Ruan X, Cacheux-Rataboul V, Sung WK, Liu ET, Wei CL, Cheung E, Ruan Y. Fullwood MJ, et al. Among authors: xu h. Nature. 2009 Nov 5;462(7269):58-64. doi: 10.1038/nature08497. Nature. 2009. PMID: 19890323 Free PMC article.

5

ChIA-PET tool for comprehensive chromatin interaction analysis with paired-end tag sequencing.

Li G, Fullwood MJ, Xu H, Mulawadi FH, Velkov S, Vega V, Ariyaratne PN, Mohamed YB, Ooi HS, Tennakoon C, Wei CL, Ruan Y, Sung WK. Li G, et al. Among authors: xu h. Genome Biol. 2010;11(2):R22. doi: 10.1186/gb-2010-11-2-r22. Epub 2010 Feb 25. Genome Biol. 2010. PMID: 20181287 Free PMC article.

6

Identifying differential histone modification sites from ChIP-seq data.

Xu H, Sung WK. Xu H, et al. Methods Mol Biol. 2012;802:293-303. doi: 10.1007/978-1-61779-400-1_19. Methods Mol Biol. 2012. PMID: 22130888

7

DREAM2 challenge.

Lee WH, Narang V, Xu H, Lin F, Chin KC, Sung WK. Lee WH, et al. Among authors: xu h. Ann N Y Acad Sci. 2009 Mar;1158:196-204. doi: 10.1111/j.1749-6632.2008.03755.x. Ann N Y Acad Sci. 2009. PMID: 19348641

8

Pathway aberrations of murine melanoma cells observed in Paired-End diTag transcriptomes.

Chiu KP, Ariyaratne P, Xu H, Tan A, Ng P, Liu ET, Ruan Y, Wei CL, Sung WK. Chiu KP, et al. Among authors: xu h. BMC Cancer. 2007 Jun 26;7:109. doi: 10.1186/1471-2407-7-109. BMC Cancer. 2007. PMID: 17594473 Free PMC article.

9

A signal-noise model for significance analysis of ChIP-seq with negative control.

Xu H, Handoko L, Wei X, Ye C, Sheng J, Wei CL, Lin F, Sung WK. Xu H, et al. Bioinformatics. 2010 May 1;26(9):1199-204. doi: 10.1093/bioinformatics/btq128. Epub 2010 Apr 5. Bioinformatics. 2010. PMID: 20371496

10

CTCF-mediated functional chromatin interactome in pluripotent cells.

Handoko L, Xu H, Li G, Ngan CY, Chew E, Schnapp M, Lee CW, Ye C, Ping JL, Mulawadi F, Wong E, Sheng J, Zhang Y, Poh T, Chan CS, Kunarso G, Shahab A, Bourque G, Cacheux-Rataboul V, Sung WK, Ruan Y, Wei CL. Handoko L, et al. Among authors: xu h. Nat Genet. 2011 Jun 19;43(7):630-8. doi: 10.1038/ng.857. Nat Genet. 2011. PMID: 21685913 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

41,800 results

Search Page