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The PredictProtein server.
Rost B, Yachdav G, Liu J. Rost B, et al. Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W321-6. doi: 10.1093/nar/gkh377. Nucleic Acids Res. 2004. PMID: 15215403 Free PMC article.
LocTree3 prediction of localization.
Goldberg T, Hecht M, Hamp T, Karl T, Yachdav G, Ahmed N, Altermann U, Angerer P, Ansorge S, Balasz K, Bernhofer M, Betz A, Cizmadija L, Do KT, Gerke J, Greil R, Joerdens V, Hastreiter M, Hembach K, Herzog M, Kalemanov M, Kluge M, Meier A, Nasir H, Neumaier U, Prade V, Reeb J, Sorokoumov A, Troshani I, Vorberg S, Waldraff S, Zierer J, Nielsen H, Rost B. Goldberg T, et al. Among authors: yachdav g. Nucleic Acids Res. 2014 Jul;42(Web Server issue):W350-5. doi: 10.1093/nar/gku396. Epub 2014 May 21. Nucleic Acids Res. 2014. PMID: 24848019 Free PMC article.
Improved disorder prediction by combination of orthogonal approaches.
Schlessinger A, Punta M, Yachdav G, Kajan L, Rost B. Schlessinger A, et al. PLoS One. 2009;4(2):e4433. doi: 10.1371/journal.pone.0004433. Epub 2009 Feb 11. PLoS One. 2009. PMID: 19209228 Free PMC article.
Structural genomics reveals EVE as a new ASCH/PUA-related domain.
Bertonati C, Punta M, Fischer M, Yachdav G, Forouhar F, Zhou W, Kuzin AP, Seetharaman J, Abashidze M, Ramelot TA, Kennedy MA, Cort JR, Belachew A, Hunt JF, Tong L, Montelione GT, Rost B. Bertonati C, et al. Proteins. 2009 May 15;75(3):760-73. doi: 10.1002/prot.22287. Proteins. 2009. PMID: 19191354 Free PMC article.
SNAP predicts effect of mutations on protein function.
Bromberg Y, Yachdav G, Rost B. Bromberg Y, et al. Bioinformatics. 2008 Oct 15;24(20):2397-8. doi: 10.1093/bioinformatics/btn435. Epub 2008 Aug 30. Bioinformatics. 2008. PMID: 18757876 Free PMC article.
PROFbval: predict flexible and rigid residues in proteins.
Schlessinger A, Yachdav G, Rost B. Schlessinger A, et al. Bioinformatics. 2006 Apr 1;22(7):891-3. doi: 10.1093/bioinformatics/btl032. Epub 2006 Feb 2. Bioinformatics. 2006. PMID: 16455751
Epitome: database of structure-inferred antigenic epitopes.
Schlessinger A, Ofran Y, Yachdav G, Rost B. Schlessinger A, et al. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D777-80. doi: 10.1093/nar/gkj053. Nucleic Acids Res. 2006. PMID: 16381978 Free PMC article.
Cloud prediction of protein structure and function with PredictProtein for Debian.
Kaján L, Yachdav G, Vicedo E, Steinegger M, Mirdita M, Angermüller C, Böhm A, Domke S, Ertl J, Mertes C, Reisinger E, Staniewski C, Rost B. Kaján L, et al. Among authors: yachdav g. Biomed Res Int. 2013;2013:398968. doi: 10.1155/2013/398968. Epub 2013 Jul 18. Biomed Res Int. 2013. PMID: 23971032 Free PMC article.
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