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Catalytic mechanism of type 2 isopentenyl diphosphate:dimethylallyl diphosphate isomerase: verification of a redox role of the flavin cofactor in a reaction with no net redox change.
Hemmi H, Ikeda Y, Yamashita S, Nakayama T, Nishino T. Hemmi H, et al. Among authors: yamashita s. Biochem Biophys Res Commun. 2004 Sep 24;322(3):905-10. doi: 10.1016/j.bbrc.2004.08.013. Biochem Biophys Res Commun. 2004. PMID: 15336549
Novel medium-chain prenyl diphosphate synthase from the thermoacidophilic archaeon Sulfolobus solfataricus.
Hemmi H, Ikejiri S, Yamashita S, Nishino T. Hemmi H, et al. Among authors: yamashita s. J Bacteriol. 2002 Feb;184(3):615-20. doi: 10.1128/jb.184.3.615-620.2002. J Bacteriol. 2002. PMID: 11790729 Free PMC article.
Type 2 isopentenyl diphosphate isomerase from a thermoacidophilic archaeon Sulfolobus shibatae.
Yamashita S, Hemmi H, Ikeda Y, Nakayama T, Nishino T. Yamashita S, et al. Eur J Biochem. 2004 Mar;271(6):1087-93. doi: 10.1111/j.1432-1033.2004.04010.x. Eur J Biochem. 2004. PMID: 15009187
In vivo interaction between the human dehydrodolichyl diphosphate synthase and the Niemann-Pick C2 protein revealed by a yeast two-hybrid system.
Kharel Y, Takahashi S, Yamashita S, Koyama T. Kharel Y, et al. Among authors: yamashita s. Biochem Biophys Res Commun. 2004 May 21;318(1):198-203. doi: 10.1016/j.bbrc.2004.04.007. Biochem Biophys Res Commun. 2004. PMID: 15110773
During certain pathological processes like Alzheimer's disease or some neurological disorders, dolichol has been shown to accumulate in human brain. ...
During certain pathological processes like Alzheimer's disease or some neurological disorders, dolichol has been shown to accumulate …
Manipulation of prenyl chain length determination mechanism of cis-prenyltransferases.
Kharel Y, Takahashi S, Yamashita S, Koyama T. Kharel Y, et al. Among authors: yamashita s. FEBS J. 2006 Feb;273(3):647-57. doi: 10.1111/j.1742-4658.2005.05097.x. FEBS J. 2006. PMID: 16420487
Product chain-length determination mechanism of Z,E-farnesyl diphosphate synthase.
Noike M, Ambo T, Kikuchi S, Suzuki T, Yamashita S, Takahashi S, Kurokawa H, Mahapatra S, Crick DC, Koyama T. Noike M, et al. Among authors: yamashita s. Biochem Biophys Res Commun. 2008 Dec 5;377(1):17-22. doi: 10.1016/j.bbrc.2008.09.014. Epub 2008 Sep 13. Biochem Biophys Res Commun. 2008. PMID: 18790692 Free PMC article.
Identification of protein-protein interactions of isoflavonoid biosynthetic enzymes with 2-hydroxyisoflavanone synthase in soybean (Glycine max (L.) Merr.).
Waki T, Yoo D, Fujino N, Mameda R, Denessiouk K, Yamashita S, Motohashi R, Akashi T, Aoki T, Ayabe S, Takahashi S, Nakayama T. Waki T, et al. Among authors: yamashita s. Biochem Biophys Res Commun. 2016 Jan 15;469(3):546-51. doi: 10.1016/j.bbrc.2015.12.038. Epub 2015 Dec 13. Biochem Biophys Res Commun. 2016. PMID: 26694697
Crystal structure of chalcone synthase, a key enzyme for isoflavonoid biosynthesis in soybean.
Imaizumi R, Mameda R, Takeshita K, Kubo H, Sakai N, Nakata S, Takahashi S, Kataoka K, Yamamoto M, Nakayama T, Yamashita S, Waki T. Imaizumi R, et al. Among authors: yamashita s. Proteins. 2020 Jul 29. doi: 10.1002/prot.25988. Online ahead of print. Proteins. 2020. PMID: 32725893
Novel sugar phosphotransferase system applicable to the efficient labeling of the compounds synthesized via the non-mevalonate pathway in Escherichia coli.
Hemmi H, Yamashita S, Nakayama T, Nishino T. Hemmi H, et al. Among authors: yamashita s. J Biosci Bioeng. 2002;93(5):515-8. doi: 10.1016/s1389-1723(02)80103-7. J Biosci Bioeng. 2002. PMID: 16233243
Novel fluorescent analogues for transmembrane movement study of polyprenyl phosphates.
Koseki K, Yamashita S, Takahashi S, Koyama T. Koseki K, et al. Among authors: yamashita s. Bioorg Med Chem Lett. 2007 Feb 15;17(4):946-50. doi: 10.1016/j.bmcl.2006.11.049. Epub 2006 Nov 18. Bioorg Med Chem Lett. 2007. PMID: 17157015
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