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Improved white spruce (Picea glauca) genome assemblies and annotation of large gene families of conifer terpenoid and phenolic defense metabolism.
Warren RL, Keeling CI, Yuen MM, Raymond A, Taylor GA, Vandervalk BP, Mohamadi H, Paulino D, Chiu R, Jackman SD, Robertson G, Yang C, Boyle B, Hoffmann M, Weigel D, Nelson DR, Ritland C, Isabel N, Jaquish B, Yanchuk A, Bousquet J, Jones SJ, MacKay J, Birol I, Bohlmann J. Warren RL, et al. Among authors: yanchuk a. Plant J. 2015 Jul;83(2):189-212. doi: 10.1111/tpj.12886. Epub 2015 Jun 19. Plant J. 2015. PMID: 26017574 Free article.
Assembling the 20 Gb white spruce (Picea glauca) genome from whole-genome shotgun sequencing data.
Birol I, Raymond A, Jackman SD, Pleasance S, Coope R, Taylor GA, Yuen MM, Keeling CI, Brand D, Vandervalk BP, Kirk H, Pandoh P, Moore RA, Zhao Y, Mungall AJ, Jaquish B, Yanchuk A, Ritland C, Boyle B, Bousquet J, Ritland K, Mackay J, Bohlmann J, Jones SJ. Birol I, et al. Among authors: yanchuk a. Bioinformatics. 2013 Jun 15;29(12):1492-7. doi: 10.1093/bioinformatics/btt178. Epub 2013 May 22. Bioinformatics. 2013. PMID: 23698863 Free PMC article.
Insights into conifer giga-genomes.
De La Torre AR, Birol I, Bousquet J, Ingvarsson PK, Jansson S, Jones SJ, Keeling CI, MacKay J, Nilsson O, Ritland K, Street N, Yanchuk A, Zerbe P, Bohlmann J. De La Torre AR, et al. Among authors: yanchuk a. Plant Physiol. 2014 Dec;166(4):1724-32. doi: 10.1104/pp.114.248708. Epub 2014 Oct 27. Plant Physiol. 2014. PMID: 25349325 Free PMC article. Review.
Genomic selection reveals hidden relatedness and increased breeding efficiency in western redcedar polycross breeding.
Gamal El-Dien O, Shalev TJ, Yuen MMS, Stirling R, Daniels LD, Breinholt JW, Neves LG, Kirst M, Van der Merwe L, Yanchuk AD, Ritland C, Russell JH, Bohlmann J. Gamal El-Dien O, et al. Among authors: yanchuk ad. Evol Appl. 2022 Aug 23;15(8):1291-1312. doi: 10.1111/eva.13463. eCollection 2022 Aug. Evol Appl. 2022. PMID: 36051463 Free PMC article.
The western redcedar genome reveals low genetic diversity in a self-compatible conifer.
Shalev TJ, Gamal El-Dien O, Yuen MMS, Shengqiang S, Jackman SD, Warren RL, Coombe L, van der Merwe L, Stewart A, Boston LB, Plott C, Jenkins J, He G, Yan J, Yan M, Guo J, Breinholt JW, Neves LG, Grimwood J, Rieseberg LH, Schmutz J, Birol I, Kirst M, Yanchuk AD, Ritland C, Russell JH, Bohlmann J. Shalev TJ, et al. Among authors: yanchuk ad. Genome Res. 2022 Oct;32(10):1952-1964. doi: 10.1101/gr.276358.121. Epub 2022 Sep 15. Genome Res. 2022. PMID: 36109148 Free PMC article.
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