Yao Z - Search Results

1

CMfinder--a covariance model based RNA motif finding algorithm.

Yao Z, Weinberg Z, Ruzzo WL. Yao Z, et al. Bioinformatics. 2006 Feb 15;22(4):445-52. doi: 10.1093/bioinformatics/btk008. Epub 2005 Dec 15. Bioinformatics. 2006. PMID: 16357030

2

A computational pipeline for high- throughput discovery of cis-regulatory noncoding RNA in prokaryotes.

Yao Z, Barrick J, Weinberg Z, Neph S, Breaker R, Tompa M, Ruzzo WL. Yao Z, et al. PLoS Comput Biol. 2007 Jul;3(7):e126. doi: 10.1371/journal.pcbi.0030126. PLoS Comput Biol. 2007. PMID: 17616982 Free PMC article.

3

A regression-based K nearest neighbor algorithm for gene function prediction from heterogeneous data.

Yao Z, Ruzzo WL. Yao Z, et al. BMC Bioinformatics. 2006 Mar 20;7 Suppl 1(Suppl 1):S11. doi: 10.1186/1471-2105-7-S1-S11. BMC Bioinformatics. 2006. PMID: 16723004 Free PMC article.

4

Discriminative motif analysis of high-throughput dataset.

Yao Z, Macquarrie KL, Fong AP, Tapscott SJ, Ruzzo WL, Gentleman RC. Yao Z, et al. Bioinformatics. 2014 Mar 15;30(6):775-83. doi: 10.1093/bioinformatics/btt615. Epub 2013 Oct 25. Bioinformatics. 2014. PMID: 24162561 Free PMC article.

5

A Marfan syndrome gene expression phenotype in cultured skin fibroblasts.

Yao Z, Jaeger JC, Ruzzo WL, Morale CZ, Emond M, Francke U, Milewicz DM, Schwartz SM, Mulvihill ER. Yao Z, et al. BMC Genomics. 2007 Sep 12;8:319. doi: 10.1186/1471-2164-8-319. BMC Genomics. 2007. PMID: 17850668 Free PMC article.

6

DUX4 binding to retroelements creates promoters that are active in FSHD muscle and testis.

Young JM, Whiddon JL, Yao Z, Kasinathan B, Snider L, Geng LN, Balog J, Tawil R, van der Maarel SM, Tapscott SJ. Young JM, et al. Among authors: yao z. PLoS Genet. 2013 Nov;9(11):e1003947. doi: 10.1371/journal.pgen.1003947. Epub 2013 Nov 21. PLoS Genet. 2013. PMID: 24278031 Free PMC article.

7

Bone morphogenetic protein 4: potential regulator of shear stress-induced graft neointimal atrophy.

Hsieh PC, Kenagy RD, Mulvihill ER, Jeanette JP, Wang X, Chang CM, Yao Z, Ruzzo WL, Justice S, Hudkins KL, Alpers CE, Berceli S, Clowes AW. Hsieh PC, et al. Among authors: yao z. J Vasc Surg. 2006 Jan;43(1):150-8. doi: 10.1016/j.jvs.2005.08.008. J Vasc Surg. 2006. PMID: 16414402 Free PMC article.

8

Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding.

Rosenberg AB, Roco CM, Muscat RA, Kuchina A, Sample P, Yao Z, Graybuck LT, Peeler DJ, Mukherjee S, Chen W, Pun SH, Sellers DL, Tasic B, Seelig G. Rosenberg AB, et al. Among authors: yao z. Science. 2018 Apr 13;360(6385):176-182. doi: 10.1126/science.aam8999. Epub 2018 Mar 15. Science. 2018. PMID: 29545511 Free PMC article.

9

Genome engineering of isogenic human ES cells to model autism disorders.

Martinez RA, Stein JL, Krostag AR, Nelson AM, Marken JS, Menon V, May RC, Yao Z, Kaykas A, Geschwind DH, Grimley JS. Martinez RA, et al. Among authors: yao z. Nucleic Acids Res. 2015 May 26;43(10):e65. doi: 10.1093/nar/gkv164. Epub 2015 Mar 11. Nucleic Acids Res. 2015. PMID: 25765640 Free PMC article.

10

Adult mouse cortical cell taxonomy revealed by single cell transcriptomics.

Tasic B, Menon V, Nguyen TN, Kim TK, Jarsky T, Yao Z, Levi B, Gray LT, Sorensen SA, Dolbeare T, Bertagnolli D, Goldy J, Shapovalova N, Parry S, Lee C, Smith K, Bernard A, Madisen L, Sunkin SM, Hawrylycz M, Koch C, Zeng H. Tasic B, et al. Among authors: yao z. Nat Neurosci. 2016 Feb;19(2):335-46. doi: 10.1038/nn.4216. Epub 2016 Jan 4. Nat Neurosci. 2016. PMID: 26727548 Free PMC article.

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