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Dynamic Modulation of the Gut Microbiota and Metabolome by Bacteriophages in a Mouse Model.
Hsu BB, Gibson TE, Yeliseyev V, Liu Q, Lyon L, Bry L, Silver PA, Gerber GK. Hsu BB, et al. Among authors: Yeliseyev V. Cell Host Microbe. 2019 Jun 12;25(6):803-814.e5. doi: 10.1016/j.chom.2019.05.001. Epub 2019 Jun 4. Cell Host Microbe. 2019. PMID: 31175044 Free PMC article.
Dynamics of the microbiota in response to host infection.
Belzer C, Gerber GK, Roeselers G, Delaney M, DuBois A, Liu Q, Belavusava V, Yeliseyev V, Houseman A, Onderdonk A, Cavanaugh C, Bry L. Belzer C, et al. Among authors: Yeliseyev V. PLoS One. 2014 Jul 11;9(7):e95534. doi: 10.1371/journal.pone.0095534. eCollection 2014. PLoS One. 2014. PMID: 25014551 Free PMC article.
MDSINE: Microbial Dynamical Systems INference Engine for microbiome time-series analyses.
Bucci V, Tzen B, Li N, Simmons M, Tanoue T, Bogart E, Deng L, Yeliseyev V, Delaney ML, Liu Q, Olle B, Stein RR, Honda K, Bry L, Gerber GK. Bucci V, et al. Among authors: Yeliseyev V. Genome Biol. 2016 Jun 3;17(1):121. doi: 10.1186/s13059-016-0980-6. Genome Biol. 2016. PMID: 27259475 Free PMC article.
Gnotobiotic and Conventional Mouse Systems to Support Microbiota Based Studies.
Lavin R, DiBenedetto N, Yeliseyev V, Delaney M, Bry L. Lavin R, et al. Among authors: Yeliseyev V. Curr Protoc Immunol. 2018 Apr;121(1):e48. doi: 10.1002/cpim.48. Epub 2018 Apr 16. Curr Protoc Immunol. 2018. PMID: 30008984 Free PMC article.
Microbiota Contribute to Obesity-related Increases in the Pulmonary Response to Ozone.
Tashiro H, Cho Y, Kasahara DI, Brand JD, Bry L, Yeliseyev V, Abu-Ali G, Huttenhower C, Shore SA. Tashiro H, et al. Among authors: Yeliseyev V. Am J Respir Cell Mol Biol. 2019 Dec;61(6):702-712. doi: 10.1165/rcmb.2019-0144OC. Am J Respir Cell Mol Biol. 2019. PMID: 31144984
Intestinal microbes influence development of thymic lymphocytes in early life.
Ennamorati M, Vasudevan C, Clerkin K, Halvorsen S, Verma S, Ibrahim S, Prosper S, Porter C, Yeliseyev V, Kim M, Gardecki J, Sassi S, Tearney G, Cherayil BJ, Bry L, Seed B, Jain N. Ennamorati M, et al. Among authors: Yeliseyev V. Proc Natl Acad Sci U S A. 2020 Feb 4;117(5):2570-2578. doi: 10.1073/pnas.1915047117. Epub 2020 Jan 21. Proc Natl Acad Sci U S A. 2020. PMID: 31964813