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Founder effects in the assessment of HIV polymorphisms and HLA allele associations.
Bhattacharya T, Daniels M, Heckerman D, Foley B, Frahm N, Kadie C, Carlson J, Yusim K, McMahon B, Gaschen B, Mallal S, Mullins JI, Nickle DC, Herbeck J, Rousseau C, Learn GH, Miura T, Brander C, Walker B, Korber B. Bhattacharya T, et al. Among authors: yusim k. Science. 2007 Mar 16;315(5818):1583-6. doi: 10.1126/science.1131528. Science. 2007. PMID: 17363674
Using human immunodeficiency virus type 1 sequences to infer historical features of the acquired immune deficiency syndrome epidemic and human immunodeficiency virus evolution.
Yusim K, Peeters M, Pybus OG, Bhattacharya T, Delaporte E, Mulanga C, Muldoon M, Theiler J, Korber B. Yusim K, et al. Philos Trans R Soc Lond B Biol Sci. 2001 Jun 29;356(1410):855-66. doi: 10.1098/rstb.2001.0859. Philos Trans R Soc Lond B Biol Sci. 2001. PMID: 11405933 Free PMC article. Review.
Diversity considerations in HIV-1 vaccine selection.
Gaschen B, Taylor J, Yusim K, Foley B, Gao F, Lang D, Novitsky V, Haynes B, Hahn BH, Bhattacharya T, Korber B. Gaschen B, et al. Among authors: yusim k. Science. 2002 Jun 28;296(5577):2354-60. doi: 10.1126/science.1070441. Science. 2002. PMID: 12089434 Review.
Consistent cytotoxic-T-lymphocyte targeting of immunodominant regions in human immunodeficiency virus across multiple ethnicities.
Frahm N, Korber BT, Adams CM, Szinger JJ, Draenert R, Addo MM, Feeney ME, Yusim K, Sango K, Brown NV, SenGupta D, Piechocka-Trocha A, Simonis T, Marincola FM, Wurcel AG, Stone DR, Russell CJ, Adolf P, Cohen D, Roach T, StJohn A, Khatri A, Davis K, Mullins J, Goulder PJ, Walker BD, Brander C. Frahm N, et al. Among authors: yusim k. J Virol. 2004 Mar;78(5):2187-200. doi: 10.1128/jvi.78.5.2187-2200.2004. J Virol. 2004. PMID: 14963115 Free PMC article.
Transmission and accumulation of CTL escape variants drive negative associations between HIV polymorphisms and HLA.
Leslie A, Kavanagh D, Honeyborne I, Pfafferott K, Edwards C, Pillay T, Hilton L, Thobakgale C, Ramduth D, Draenert R, Le Gall S, Luzzi G, Edwards A, Brander C, Sewell AK, Moore S, Mullins J, Moore C, Mallal S, Bhardwaj N, Yusim K, Phillips R, Klenerman P, Korber B, Kiepiela P, Walker B, Goulder P. Leslie A, et al. Among authors: yusim k. J Exp Med. 2005 Mar 21;201(6):891-902. doi: 10.1084/jem.20041455. J Exp Med. 2005. PMID: 15781581 Free PMC article.
Los alamos hepatitis C immunology database.
Yusim K, Richardson R, Tao N, Dalwani A, Agrawal A, Szinger J, Funkhouser R, Korber B, Kuiken C. Yusim K, et al. Appl Bioinformatics. 2005;4(4):217-25. doi: 10.2165/00822942-200504040-00002. Appl Bioinformatics. 2005. PMID: 16309340
Impact of HLA-B alleles, epitope binding affinity, functional avidity, and viral coinfection on the immunodominance of virus-specific CTL responses.
Bihl F, Frahm N, Di Giammarino L, Sidney J, John M, Yusim K, Woodberry T, Sango K, Hewitt HS, Henry L, Linde CH, Chisholm JV 3rd, Zaman TM, Pae E, Mallal S, Walker BD, Sette A, Korber BT, Heckerman D, Brander C. Bihl F, et al. Among authors: yusim k. J Immunol. 2006 Apr 1;176(7):4094-101. doi: 10.4049/jimmunol.176.7.4094. J Immunol. 2006. PMID: 16547245
47 results