Zang C - Search Results

1

An integrative ENCODE resource for cancer genomics.

Zhang J, Lee D, Dhiman V, Jiang P, Xu J, McGillivray P, Yang H, Liu J, Meyerson W, Clarke D, Gu M, Li S, Lou S, Xu J, Lochovsky L, Ung M, Ma L, Yu S, Cao Q, Harmanci A, Yan KK, Sethi A, Gürsoy G, Schoenberg MR, Rozowsky J, Warrell J, Emani P, Yang YT, Galeev T, Kong X, Liu S, Li X, Krishnan J, Feng Y, Rivera-Mulia JC, Adrian J, Broach JR, Bolt M, Moran J, Fitzgerald D, Dileep V, Liu T, Mei S, Sasaki T, Trevilla-Garcia C, Wang S, Wang Y, Zang C, Wang D, Klein RJ, Snyder M, Gilbert DM, Yip K, Cheng C, Yue F, Liu XS, White KP, Gerstein M. Zhang J, et al. Among authors: zang c. Nat Commun. 2020 Jul 29;11(1):3696. doi: 10.1038/s41467-020-14743-w. Nat Commun. 2020. PMID: 32728046 Free PMC article.

2

Target analysis by integration of transcriptome and ChIP-seq data with BETA.

Wang S, Sun H, Ma J, Zang C, Wang C, Wang J, Tang Q, Meyer CA, Zhang Y, Liu XS. Wang S, et al. Among authors: zang c. Nat Protoc. 2013 Dec;8(12):2502-15. doi: 10.1038/nprot.2013.150. Epub 2013 Nov 21. Nat Protoc. 2013. PMID: 24263090 Free PMC article.

3

Refined DNase-seq protocol and data analysis reveals intrinsic bias in transcription factor footprint identification.

He HH, Meyer CA, Hu SS, Chen MW, Zang C, Liu Y, Rao PK, Fei T, Xu H, Long H, Liu XS, Brown M. He HH, et al. Among authors: zang c. Nat Methods. 2014 Jan;11(1):73-78. doi: 10.1038/nmeth.2762. Epub 2013 Dec 8. Nat Methods. 2014. PMID: 24317252 Free PMC article.

4

NOTCH1-RBPJ complexes drive target gene expression through dynamic interactions with superenhancers.

Wang H, Zang C, Taing L, Arnett KL, Wong YJ, Pear WS, Blacklow SC, Liu XS, Aster JC. Wang H, et al. Among authors: zang c. Proc Natl Acad Sci U S A. 2014 Jan 14;111(2):705-10. doi: 10.1073/pnas.1315023111. Epub 2013 Dec 27. Proc Natl Acad Sci U S A. 2014. PMID: 24374627 Free PMC article.

5

Active enhancers are delineated de novo during hematopoiesis, with limited lineage fidelity among specified primary blood cells.

Luyten A, Zang C, Liu XS, Shivdasani RA. Luyten A, et al. Among authors: zang c. Genes Dev. 2014 Aug 15;28(16):1827-39. doi: 10.1101/gad.240101.114. Genes Dev. 2014. PMID: 25128499 Free PMC article.

6

The role of Notch receptors in transcriptional regulation.

Wang H, Zang C, Liu XS, Aster JC. Wang H, et al. Among authors: zang c. J Cell Physiol. 2015 May;230(5):982-8. doi: 10.1002/jcp.24872. J Cell Physiol. 2015. PMID: 25418913 Free PMC article. Review.

7

Network analysis of gene essentiality in functional genomics experiments.

Jiang P, Wang H, Li W, Zang C, Li B, Wong YJ, Meyer C, Liu JS, Aster JC, Liu XS. Jiang P, et al. Among authors: zang c. Genome Biol. 2015 Oct 30;16:239. doi: 10.1186/s13059-015-0808-9. Genome Biol. 2015. PMID: 26518695 Free PMC article.

8

Integrative Analysis Reveals the Transcriptional Collaboration between EZH2 and E2F1 in the Regulation of Cancer-Related Gene Expression.

Xu H, Xu K, He HH, Zang C, Chen CH, Chen Y, Qin Q, Wang S, Wang C, Hu S, Li F, Long H, Brown M, Liu XS. Xu H, et al. Among authors: zang c. Mol Cancer Res. 2016 Feb;14(2):163-172. doi: 10.1158/1541-7786.MCR-15-0313. Epub 2015 Dec 9. Mol Cancer Res. 2016. PMID: 26659825 Free PMC article.

9

High-dimensional genomic data bias correction and data integration using MANCIE.

Zang C, Wang T, Deng K, Li B, Hu S, Qin Q, Xiao T, Zhang S, Meyer CA, He HH, Brown M, Liu JS, Xie Y, Liu XS. Zang C, et al. Nat Commun. 2016 Apr 13;7:11305. doi: 10.1038/ncomms11305. Nat Commun. 2016. PMID: 27072482 Free PMC article.

10

NF-E2, FLI1 and RUNX1 collaborate at areas of dynamic chromatin to activate transcription in mature mouse megakaryocytes.

Zang C, Luyten A, Chen J, Liu XS, Shivdasani RA. Zang C, et al. Sci Rep. 2016 Jul 26;6:30255. doi: 10.1038/srep30255. Sci Rep. 2016. PMID: 27457419 Free PMC article.

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