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ViPR: an open bioinformatics database and analysis resource for virology research.
Pickett BE, Sadat EL, Zhang Y, Noronha JM, Squires RB, Hunt V, Liu M, Kumar S, Zaremba S, Gu Z, Zhou L, Larson CN, Dietrich J, Klem EB, Scheuermann RH. Pickett BE, et al. Among authors: zaremba s. Nucleic Acids Res. 2012 Jan;40(Database issue):D593-8. doi: 10.1093/nar/gkr859. Epub 2011 Oct 17. Nucleic Acids Res. 2012. PMID: 22006842 Free PMC article.
Influenza research database: an integrated bioinformatics resource for influenza research and surveillance.
Squires RB, Noronha J, Hunt V, García-Sastre A, Macken C, Baumgarth N, Suarez D, Pickett BE, Zhang Y, Larsen CN, Ramsey A, Zhou L, Zaremba S, Kumar S, Deitrich J, Klem E, Scheuermann RH. Squires RB, et al. Among authors: zaremba s. Influenza Other Respir Viruses. 2012 Nov;6(6):404-16. doi: 10.1111/j.1750-2659.2011.00331.x. Epub 2012 Jan 20. Influenza Other Respir Viruses. 2012. PMID: 22260278 Free PMC article.
Influenza Research Database: An integrated bioinformatics resource for influenza virus research.
Zhang Y, Aevermann BD, Anderson TK, Burke DF, Dauphin G, Gu Z, He S, Kumar S, Larsen CN, Lee AJ, Li X, Macken C, Mahaffey C, Pickett BE, Reardon B, Smith T, Stewart L, Suloway C, Sun G, Tong L, Vincent AL, Walters B, Zaremba S, Zhao H, Zhou L, Zmasek C, Klem EB, Scheuermann RH. Zhang Y, et al. Among authors: zaremba s. Nucleic Acids Res. 2017 Jan 4;45(D1):D466-D474. doi: 10.1093/nar/gkw857. Epub 2016 Sep 26. Nucleic Acids Res. 2017. PMID: 27679478 Free PMC article.
Metadata-driven comparative analysis tool for sequences (meta-CATS): an automated process for identifying significant sequence variations that correlate with virus attributes.
Pickett BE, Liu M, Sadat EL, Squires RB, Noronha JM, He S, Jen W, Zaremba S, Gu Z, Zhou L, Larsen CN, Bosch I, Gehrke L, McGee M, Klem EB, Scheuermann RH. Pickett BE, et al. Among authors: zaremba s. Virology. 2013 Dec;447(1-2):45-51. doi: 10.1016/j.virol.2013.08.021. Epub 2013 Sep 14. Virology. 2013. PMID: 24210098 Free PMC article.
Enteropathogen Resource Integration Center (ERIC): bioinformatics support for research on biodefense-relevant enterobacteria.
Glasner JD, Plunkett G 3rd, Anderson BD, Baumler DJ, Biehl BS, Burland V, Cabot EL, Darling AE, Mau B, Neeno-Eckwall EC, Pot D, Qiu Y, Rissman AI, Worzella S, Zaremba S, Fedorko J, Hampton T, Liss P, Rusch M, Shaker M, Shaull L, Shetty P, Thotakura S, Whitmore J, Blattner FR, Greene JM, Perna NT. Glasner JD, et al. Among authors: zaremba s. Nucleic Acids Res. 2008 Jan;36(Database issue):D519-23. doi: 10.1093/nar/gkm973. Epub 2007 Nov 13. Nucleic Acids Res. 2008. PMID: 17999997 Free PMC article.
A new asset for pathogen informatics--the Enteropathogen Resource Integration Center (ERIC), an NIAID Bioinformatics Resource Center for Biodefense and Emerging/Re-emerging Infectious Disease.
Greene JM, Plunkett G 3rd, Burland V, Glasner J, Cabot E, Anderson B, Neeno-Eckwall E, Qiu Y, Mau B, Rusch M, Liss P, Hampton T, Pot D, Shaker M, Shaull L, Shetty P, Shi C, Whitmore J, Wong M, Zaremba S, Blattner FR, Perna NT. Greene JM, et al. Among authors: zaremba s. Adv Exp Med Biol. 2007;603:28-42. doi: 10.1007/978-0-387-72124-8_4. Adv Exp Med Biol. 2007. PMID: 17966403
Outpatient treatment with concomitant vaccine-boosted convalescent plasma for patients with immunosuppression and COVID-19.
Ripoll JG, Tulledge-Scheitel SM, Stephenson AA, Ford S, Pike ML, Gorman EK, Hanson SN, Juskewitch JE, Miller AJ, Zaremba S, Ovrom EA, Razonable RR, Ganesh R, Hurt RT, Fischer EN, Derr AN, Eberle MR, Larsen JJ, Carney CM, Theel ES, Parikh SA, Kay NE, Joyner MJ, Senefeld JW. Ripoll JG, et al. Among authors: zaremba s. mBio. 2024 Apr 11:e0040024. doi: 10.1128/mbio.00400-24. Online ahead of print. mBio. 2024. PMID: 38602414 Free article.
91 results