Zarnack K - Search Results

1

Direct competition between hnRNP C and U2AF65 protects the transcriptome from the exonization of Alu elements.

Zarnack K, König J, Tajnik M, Martincorena I, Eustermann S, Stévant I, Reyes A, Anders S, Luscombe NM, Ule J. Zarnack K, et al. Cell. 2013 Jan 31;152(3):453-66. doi: 10.1016/j.cell.2012.12.023. Cell. 2013. PMID: 23374342 Free PMC article.

2

Npl3 functions in mRNP assembly by recruitment of mRNP components to the transcription site and their transfer onto the mRNA.

Keil P, Wulf A, Kachariya N, Reuscher S, Hühn K, Silbern I, Altmüller J, Keller M, Stehle R, Zarnack K, Sattler M, Urlaub H, Sträßer K. Keil P, et al. Among authors: zarnack k. Nucleic Acids Res. 2023 Jan 25;51(2):831-851. doi: 10.1093/nar/gkac1206. Nucleic Acids Res. 2023. PMID: 36583366 Free PMC article.

3

iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution.

König J, Zarnack K, Rot G, Curk T, Kayikci M, Zupan B, Turner DJ, Luscombe NM, Ule J. König J, et al. Among authors: zarnack k. Nat Struct Mol Biol. 2010 Jul;17(7):909-15. doi: 10.1038/nsmb.1838. Epub 2010 Jul 4. Nat Struct Mol Biol. 2010. PMID: 20601959 Free PMC article.

4

iCLIP predicts the dual splicing effects of TIA-RNA interactions.

Wang Z, Kayikci M, Briese M, Zarnack K, Luscombe NM, Rot G, Zupan B, Curk T, Ule J. Wang Z, et al. Among authors: zarnack k. PLoS Biol. 2010 Oct 26;8(10):e1000530. doi: 10.1371/journal.pbio.1000530. PLoS Biol. 2010. PMID: 21048981 Free PMC article.

5

iCLIP--transcriptome-wide mapping of protein-RNA interactions with individual nucleotide resolution.

Konig J, Zarnack K, Rot G, Curk T, Kayikci M, Zupan B, Turner DJ, Luscombe NM, Ule J. Konig J, et al. Among authors: zarnack k. J Vis Exp. 2011 Apr 30;(50):2638. doi: 10.3791/2638. J Vis Exp. 2011. PMID: 21559008 Free PMC article.

6

The RNA-binding protein Rrm4 is essential for efficient secretion of endochitinase Cts1.

Koepke J, Kaffarnik F, Haag C, Zarnack K, Luscombe NM, König J, Ule J, Kellner R, Begerow D, Feldbrügge M. Koepke J, et al. Among authors: zarnack k. Mol Cell Proteomics. 2011 Dec;10(12):M111.011213. doi: 10.1074/mcp.M111.011213. Epub 2011 Aug 1. Mol Cell Proteomics. 2011. PMID: 21808052 Free PMC article.

7

Analysis of alternative splicing associated with aging and neurodegeneration in the human brain.

Tollervey JR, Wang Z, Hortobágyi T, Witten JT, Zarnack K, Kayikci M, Clark TA, Schweitzer AC, Rot G, Curk T, Zupan B, Rogelj B, Shaw CE, Ule J. Tollervey JR, et al. Among authors: zarnack k. Genome Res. 2011 Oct;21(10):1572-82. doi: 10.1101/gr.122226.111. Epub 2011 Aug 16. Genome Res. 2011. PMID: 21846794 Free PMC article.

8

Protein-RNA interactions: new genomic technologies and perspectives.

König J, Zarnack K, Luscombe NM, Ule J. König J, et al. Among authors: zarnack k. Nat Rev Genet. 2012 Jan 18;13(2):77-83. doi: 10.1038/nrg3141. Nat Rev Genet. 2012. PMID: 22251872 Review.

9

The RNA-binding protein HuR is essential for the B cell antibody response.

Diaz-Muñoz MD, Bell SE, Fairfax K, Monzon-Casanova E, Cunningham AF, Gonzalez-Porta M, Andrews SR, Bunik VI, Zarnack K, Curk T, Heggermont WA, Heymans S, Gibson GE, Kontoyiannis DL, Ule J, Turner M. Diaz-Muñoz MD, et al. Among authors: zarnack k. Nat Immunol. 2015 Apr;16(4):415-25. doi: 10.1038/ni.3115. Epub 2015 Feb 23. Nat Immunol. 2015. PMID: 25706746 Free PMC article.

10

Control of a neuronal morphology program by an RNA-binding zinc finger protein, Unkempt.

Murn J, Zarnack K, Yang YJ, Durak O, Murphy EA, Cheloufi S, Gonzalez DM, Teplova M, Curk T, Zuber J, Patel DJ, Ule J, Luscombe NM, Tsai LH, Walsh CA, Shi Y. Murn J, et al. Among authors: zarnack k. Genes Dev. 2015 Mar 1;29(5):501-12. doi: 10.1101/gad.258483.115. Genes Dev. 2015. PMID: 25737280 Free PMC article.

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