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Biochemical and synthetic biology approaches to improve photosynthetic CO2-fixation.
Erb TJ, Zarzycki J. Erb TJ, et al. Among authors: zarzycki j. Curr Opin Chem Biol. 2016 Oct;34:72-79. doi: 10.1016/j.cbpa.2016.06.026. Epub 2016 Jul 9. Curr Opin Chem Biol. 2016. PMID: 27400232 Review.
Introduction of a synthetic CO₂-fixing photorespiratory bypass into a cyanobacterium.
Shih PM, Zarzycki J, Niyogi KK, Kerfeld CA. Shih PM, et al. Among authors: zarzycki j. J Biol Chem. 2014 Apr 4;289(14):9493-500. doi: 10.1074/jbc.C113.543132. Epub 2014 Feb 20. J Biol Chem. 2014. PMID: 24558040 Free PMC article.
A short history of RubisCO: the rise and fall (?) of Nature's predominant CO2 fixing enzyme.
Erb TJ, Zarzycki J. Erb TJ, et al. Among authors: zarzycki j. Curr Opin Biotechnol. 2018 Feb;49:100-107. doi: 10.1016/j.copbio.2017.07.017. Epub 2017 Aug 29. Curr Opin Biotechnol. 2018. PMID: 28843191 Review.
The multicatalytic compartment of propionyl-CoA synthase sequesters a toxic metabolite.
Bernhardsgrütter I, Vögeli B, Wagner T, Peter DM, Cortina NS, Kahnt J, Bange G, Engilberge S, Girard E, Riobé F, Maury O, Shima S, Zarzycki J, Erb TJ. Bernhardsgrütter I, et al. Among authors: zarzycki j. Nat Chem Biol. 2018 Dec;14(12):1127-1132. doi: 10.1038/s41589-018-0153-x. Epub 2018 Oct 29. Nat Chem Biol. 2018. PMID: 30374166 Free PMC article.
Design and in vitro realization of carbon-conserving photorespiration.
Trudeau DL, Edlich-Muth C, Zarzycki J, Scheffen M, Goldsmith M, Khersonsky O, Avizemer Z, Fleishman SJ, Cotton CAR, Erb TJ, Tawfik DS, Bar-Even A. Trudeau DL, et al. Among authors: zarzycki j. Proc Natl Acad Sci U S A. 2018 Dec 4;115(49):E11455-E11464. doi: 10.1073/pnas.1812605115. Epub 2018 Nov 20. Proc Natl Acad Sci U S A. 2018. PMID: 30459276 Free PMC article.
Sulfur-Oxidizing Symbionts without Canonical Genes for Autotrophic CO2 Fixation.
Seah BKB, Antony CP, Huettel B, Zarzycki J, Schada von Borzyskowski L, Erb TJ, Kouris A, Kleiner M, Liebeke M, Dubilier N, Gruber-Vodicka HR. Seah BKB, et al. Among authors: zarzycki j. mBio. 2019 Jun 25;10(3):e01112-19. doi: 10.1128/mBio.01112-19. mBio. 2019. PMID: 31239380 Free PMC article.
Four amino acids define the CO2 binding pocket of enoyl-CoA carboxylases/reductases.
Stoffel GMM, Saez DA, DeMirci H, Vögeli B, Rao Y, Zarzycki J, Yoshikuni Y, Wakatsuki S, Vöhringer-Martinez E, Erb TJ. Stoffel GMM, et al. Among authors: zarzycki j. Proc Natl Acad Sci U S A. 2019 Jul 9;116(28):13964-13969. doi: 10.1073/pnas.1901471116. Epub 2019 Jun 26. Proc Natl Acad Sci U S A. 2019. PMID: 31243147 Free PMC article.
Cyanobacterial-based approaches to improving photosynthesis in plants.
Zarzycki J, Axen SD, Kinney JN, Kerfeld CA. Zarzycki J, et al. J Exp Bot. 2013 Jan;64(3):787-98. doi: 10.1093/jxb/ers294. Epub 2012 Oct 23. J Exp Bot. 2013. PMID: 23095996 Review.
Metaproteomics of a gutless marine worm and its symbiotic microbial community reveal unusual pathways for carbon and energy use.
Kleiner M, Wentrup C, Lott C, Teeling H, Wetzel S, Young J, Chang YJ, Shah M, VerBerkmoes NC, Zarzycki J, Fuchs G, Markert S, Hempel K, Voigt B, Becher D, Liebeke M, Lalk M, Albrecht D, Hecker M, Schweder T, Dubilier N. Kleiner M, et al. Among authors: zarzycki j. Proc Natl Acad Sci U S A. 2012 May 8;109(19):E1173-82. doi: 10.1073/pnas.1121198109. Epub 2012 Apr 18. Proc Natl Acad Sci U S A. 2012. PMID: 22517752 Free PMC article.
Bioinformatic characterization of glycyl radical enzyme-associated bacterial microcompartments.
Zarzycki J, Erbilgin O, Kerfeld CA. Zarzycki J, et al. Appl Environ Microbiol. 2015 Dec;81(24):8315-29. doi: 10.1128/AEM.02587-15. Epub 2015 Sep 25. Appl Environ Microbiol. 2015. PMID: 26407889 Free PMC article.
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