Zavaljevski N - Search Results

1

Oligonucleotide fingerprint identification for microarray-based pathogen diagnostic assays.

Tembe W, Zavaljevski N, Bode E, Chase C, Geyer J, Wasieloski L, Benson G, Reifman J. Tembe W, et al. Among authors: zavaljevski n. Bioinformatics. 2007 Jan 1;23(1):5-13. doi: 10.1093/bioinformatics/btl549. Epub 2006 Oct 26. Bioinformatics. 2007. PMID: 17068088

2

Using host-pathogen protein interactions to identify and characterize Francisella tularensis virulence factors.

Wallqvist A, Memišević V, Zavaljevski N, Pieper R, Rajagopala SV, Kwon K, Yu C, Hoover TA, Reifman J. Wallqvist A, et al. Among authors: zavaljevski n. BMC Genomics. 2015 Dec 29;16:1106. doi: 10.1186/s12864-015-2351-1. BMC Genomics. 2015. PMID: 26714771 Free PMC article.

3

Novel Burkholderia mallei virulence factors linked to specific host-pathogen protein interactions.

Memisević V, Zavaljevski N, Pieper R, Rajagopala SV, Kwon K, Townsend K, Yu C, Yu X, DeShazer D, Reifman J, Wallqvist A. Memisević V, et al. Among authors: zavaljevski n. Mol Cell Proteomics. 2013 Nov;12(11):3036-51. doi: 10.1074/mcp.M113.029041. Epub 2013 Jun 24. Mol Cell Proteomics. 2013. PMID: 23800426 Free PMC article.

4

DBSecSys 2.0: a database of Burkholderia mallei and Burkholderia pseudomallei secretion systems.

Memišević V, Kumar K, Zavaljevski N, DeShazer D, Wallqvist A, Reifman J. Memišević V, et al. Among authors: zavaljevski n. BMC Bioinformatics. 2016 Sep 20;17:387. doi: 10.1186/s12859-016-1242-z. BMC Bioinformatics. 2016. PMID: 27650316 Free PMC article.

5

Mining host-pathogen protein interactions to characterize Burkholderia mallei infectivity mechanisms.

Memišević V, Zavaljevski N, Rajagopala SV, Kwon K, Pieper R, DeShazer D, Reifman J, Wallqvist A. Memišević V, et al. Among authors: zavaljevski n. PLoS Comput Biol. 2015 Mar 4;11(3):e1004088. doi: 10.1371/journal.pcbi.1004088. eCollection 2015 Mar. PLoS Comput Biol. 2015. PMID: 25738731 Free PMC article.

6

DBSecSys: a database of Burkholderia mallei secretion systems.

Memišević V, Kumar K, Cheng L, Zavaljevski N, DeShazer D, Wallqvist A, Reifman J. Memišević V, et al. Among authors: zavaljevski n. BMC Bioinformatics. 2014 Jul 16;15(1):244. doi: 10.1186/1471-2105-15-244. BMC Bioinformatics. 2014. PMID: 25030112 Free PMC article.

7

SNIT: SNP identification for strain typing.

Vijaya Satya R, Zavaljevski N, Reifman J. Vijaya Satya R, et al. Among authors: zavaljevski n. Source Code Biol Med. 2011 Sep 8;6:14. doi: 10.1186/1751-0473-6-14. Source Code Biol Med. 2011. PMID: 21902825 Free PMC article.

8

QuartetS: a fast and accurate algorithm for large-scale orthology detection.

Yu C, Zavaljevski N, Desai V, Reifman J. Yu C, et al. Among authors: zavaljevski n. Nucleic Acids Res. 2011 Jul;39(13):e88. doi: 10.1093/nar/gkr308. Epub 2011 May 13. Nucleic Acids Res. 2011. PMID: 21572104 Free PMC article.

9

AGeS: a software system for microbial genome sequence annotation.

Kumar K, Desai V, Cheng L, Khitrov M, Grover D, Satya RV, Yu C, Zavaljevski N, Reifman J. Kumar K, et al. Among authors: zavaljevski n. PLoS One. 2011 Mar 7;6(3):e17469. doi: 10.1371/journal.pone.0017469. PLoS One. 2011. PMID: 21408217 Free PMC article.

10

A high-throughput pipeline for the design of real-time PCR signatures.

Vijaya Satya R, Kumar K, Zavaljevski N, Reifman J. Vijaya Satya R, et al. Among authors: zavaljevski n. BMC Bioinformatics. 2010 Jun 23;11:340. doi: 10.1186/1471-2105-11-340. BMC Bioinformatics. 2010. PMID: 20573238 Free PMC article.

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