Zhan X - Search Results

1

GIANA allows computationally-efficient TCR clustering and multi-disease repertoire classification by isometric transformation.

Zhang H, Zhan X, Li B. Zhang H, et al. Nat Commun. 2021 Aug 4;12(1):4699. doi: 10.1038/s41467-021-25006-7. Nat Commun. 2021. PMID: 34349111 Free PMC article.

2

Transforming activity of an oncoprotein-encoding circular RNA from human papillomavirus.

Zhao J, Lee EE, Kim J, Yang R, Chamseddin B, Ni C, Gusho E, Xie Y, Chiang CM, Buszczak M, Zhan X, Laimins L, Wang RC. Zhao J, et al. Nat Commun. 2019 May 24;10(1):2300. doi: 10.1038/s41467-019-10246-5. Nat Commun. 2019. PMID: 31127091 Free PMC article.

3

Investigation of Antigen-Specific T-Cell Receptor Clusters in Human Cancers.

Zhang H, Liu L, Zhang J, Chen J, Ye J, Shukla S, Qiao J, Zhan X, Chen H, Wu CJ, Fu YX, Li B. Zhang H, et al. Clin Cancer Res. 2020 Mar 15;26(6):1359-1371. doi: 10.1158/1078-0432.CCR-19-3249. Epub 2019 Dec 12. Clin Cancer Res. 2020. PMID: 31831563

4

Publisher Correction: GIANA allows computationally-efficient TCR clustering and multi-disease repertoire classification by isometric transformation.

Zhang H, Zhan X, Li B. Zhang H, et al. Nat Commun. 2021 Sep 3;12(1):5334. doi: 10.1038/s41467-021-25693-2. Nat Commun. 2021. PMID: 34480025 Free PMC article. No abstract available.

5

Author Correction: Transforming activity of an oncoprotein-encoding circular RNA from human papillomavirus.

Zhao J, Lee EE, Kim J, Yang R, Chamseddin B, Ni C, Gusho E, Xie Y, Chiang CM, Buszczak M, Zhan X, Laimins L, Wang RC. Zhao J, et al. Nat Commun. 2022 May 18;13(1):2889. doi: 10.1038/s41467-022-30659-z. Nat Commun. 2022. PMID: 35585072 Free PMC article. No abstract available.

6

MB-SupCon: Microbiome-based Predictive Models via Supervised Contrastive Learning.

Yang S, Wang S, Wang Y, Rong R, Kim J, Li B, Koh AY, Xiao G, Li Q, Liu DJ, Zhan X. Yang S, et al. J Mol Biol. 2022 Aug 15;434(15):167693. doi: 10.1016/j.jmb.2022.167693. Epub 2022 Jun 28. J Mol Biol. 2022. PMID: 35777465 Free PMC article.

7

Analysis of KIR gene variants in The Cancer Genome Atlas and UK Biobank using KIRCLE.

Gao GF, Liu D, Zhan X, Li B. Gao GF, et al. BMC Biol. 2022 Aug 24;20(1):191. doi: 10.1186/s12915-022-01392-2. BMC Biol. 2022. PMID: 36002830 Free PMC article.

8

Integrating single cell expression quantitative trait loci summary statistics to understand complex trait risk genes.

Wang L, Khunsriraksakul C, Markus H, Chen D, Zhang F, Chen F, Zhan X, Carrel L, Liu DJ, Jiang B. Wang L, et al. Nat Commun. 2024 May 20;15(1):4260. doi: 10.1038/s41467-024-48143-1. Nat Commun. 2024. PMID: 38769300 Free PMC article.

9

Interpretable GWAS by linking clinical phenotypes to quantifiable immune repertoire components.

Tan Y, Wang L, Zhang H, Pan M, Liu DJ, Zhan X, Li B. Tan Y, et al. Commun Biol. 2024 Oct 20;7(1):1357. doi: 10.1038/s42003-024-07010-x. Commun Biol. 2024. PMID: 39428403 Free PMC article.

10

Quantitative and large-scale investigation of human TCR-HLA cross-reactivity.

Pan M, Tan Y, Wang YT, Hu J, Fleming J, Hu H, Yang Z, Zhan X, Li B. Pan M, et al. Sci Adv. 2025 Oct 24;11(43):eadx1751. doi: 10.1126/sciadv.adx1751. Epub 2025 Oct 24. Sci Adv. 2025. PMID: 41134880 Free PMC article.

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